[←][→] ath   AT1G11290 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0016556 [list] [network] mRNA modification  (44 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_172596.1 
BLAST NP_172596.1 
Orthologous [Ortholog page] LOC4339896 (osa)  LOC7460274 (ppo)  LOC25488565 (mtr)  LOC25488566 (mtr)  LOC100262586 (vvi)  LOC100801345 (gma)  LOC100802087 (gma)  LOC101265612 (sly)  LOC103842182 (bra)  LOC114574132 (zma) 
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_172596.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_172596.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CRR22 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820319
6.6 AT3G24000 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821984
6.3 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835362
5.4 CRR28 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 842263
5.0 GLR5 glutamate receptor 5 [detail] 817801
4.4 VFB3 VIER F-box protein 3 [detail] 826171
Coexpressed
gene list		 [Coexpressed gene list for CRR22]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262509_at
262509_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262509_at
262509_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262509_at
262509_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837671      
Refseq ID (protein) NP_172596.1 


The preparation time of this page was 0.4 [sec].