[←][→] ath   At1g11720 Gene
functional annotation
Function   starch synthase 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010021 [list] [network] amylopectin biosynthetic process  (7 genes)  IGI  
GO:0019252 [list] [network] starch biosynthetic process  (25 genes)  IEA IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0033201 [list] [network] alpha-1,4-glucan synthase activity  (4 genes)  IEA  
GO:0004373 [list] [network] glycogen (starch) synthase activity  (5 genes)  IEA  
GO:0009011 [list] [network] starch synthase activity  (5 genes)  IEA IMP  
GO:2001070 [list] [network] starch binding  (8 genes)  IEA  
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0016757 [list] [network] glycosyltransferase activity  (567 genes)  ISS  
KEGG ath00500 [list] [network] Starch and sucrose metabolism (172 genes)
Protein NP_001184965.1  NP_172637.2 
BLAST NP_001184965.1  NP_172637.2 
Orthologous [Ortholog page] LOC4337056 (osa)  LOC7479050 (ppo)  LOC25486162 (mtr)  LOC100136992 (tae)  LOC100316882 (sly)  LOC100790973 (gma)  LOC100797872 (gma)  LOC100801729 (gma)  LOC103836215 (bra)  LOC103871924 (bra)  LOC123180520 (tae)  LOC123190488 (tae)  LOC123425502 (hvu)  LOC123427900 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto 2,  pero 1,  cysk 1  (predict for NP_001184965.1)
mito 5,  chlo_mito 4,  chlo 2,  cyto 2  (predict for NP_172637.2)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for NP_001184965.1)
mito 5,  chlo 4  (predict for NP_172637.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 7
Genes directly connected with SS3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 AT5G08720 polyketide cyclase/dehydrase/lipid transporter [detail] 830772
5.6 AT4G33500 Protein phosphatase 2C family protein [detail] 829488
5.6 ISA1 isoamylase 1 [detail] 818580
5.4 AT5G63700 zinc ion binding / DNA binding protein [detail] 836490
5.1 HA11 H[+]-ATPase 11 [detail] 836388
Coexpressed
gene list		 [Coexpressed gene list for SS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262809_at
262809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262809_at
262809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262809_at
262809_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837716      
Refseq ID (protein) NP_001184965.1 
NP_172637.2 


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