[←][→] ath   AT1G11750 Gene
functional annotation
Function   CLP protease proteolytic subunit 6  
GO BP
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0015979 [list] [network] photosynthesis  (206 genes)  IMP  
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA IEA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
KEGG
Protein NP_001184966.1  NP_563893.1 
BLAST NP_001184966.1  NP_563893.1 
Orthologous [Ortholog page] LOC543966 (sly)  LOC4333096 (osa)  LOC7469984 (ppo)  LOC11412973 (mtr)  LOC100272787 (zma)  LOC100796744 (gma)  LOC100799710 (gma)  LOC100852857 (vvi)  LOC103836208 (bra)  LOC103843228 (bra) 
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_001184966.1)
mito 6,  chlo 4  (predict for NP_563893.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001184966.1)
chlo 9,  mito 3  (predict for NP_563893.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
Genes directly connected with CLPP6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 CLPP5 nuclear encoded CLP protease 5 [detail] 839433
9.2 CLP2 CLP protease proteolytic subunit 2 [detail] 837797
9.1 CLPR4 CLP protease R subunit 4 [detail] 827412
8.9 Pnsl5 cyclophilin 20-2 [detail] 831151
8.8 AT4G25370 Double Clp-N motif protein [detail] 828640
8.5 CDF1 cell growth defect factor-like protein (DUF3353) [detail] 832368
8.3 CLPP4 CLP protease P4 [detail] 834575
8.3 CLPP3 CLP protease proteolytic subunit 3 [detail] 842985
8.2 AT2G20270 Thioredoxin superfamily protein [detail] 816546
8.0 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 818813
7.2 AT3G32930 6,7-dimethyl-8-ribityllumazine synthase [detail] 823057
7.1 AT3G60210 GroES-like family protein [detail] 825191
Coexpressed
gene list		 [Coexpressed gene list for CLPP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262823_at
262823_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262823_at
262823_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262823_at
262823_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837719      
Refseq ID (protein) NP_001184966.1 
NP_563893.1 


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