[←][→] ath   At1g11750 Gene
functional annotation
Function   CLP protease proteolytic subunit 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0015979 [list] [network] photosynthesis  (167 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG
Protein NP_001184966.1  NP_563893.1 
BLAST NP_001184966.1  NP_563893.1 
Orthologous [Ortholog page] LOC543966 (sly)  LOC4333096 (osa)  LOC7464042 (ppo)  LOC7469984 (ppo)  LOC11412973 (mtr)  LOC100415860 (tae)  LOC100796744 (gma)  LOC100799710 (gma)  LOC103836208 (bra)  LOC103843228 (bra)  LOC123085952 (tae)  LOC123097306 (tae)  LOC123448508 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_001184966.1)
mito 6,  chlo 4  (predict for NP_563893.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001184966.1)
chlo 9,  mito 3  (predict for NP_563893.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
Genes directly connected with CLPP6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.3 CLPP5 nuclear encoded CLP protease 5 [detail] 839433
10.4 CLP2 CLP protease proteolytic subunit 2 [detail] 837797
10.1 CLPP4 CLP protease P4 [detail] 834575
8.2 AT2G20270 Thioredoxin superfamily protein [detail] 816546
7.5 NAP7 non-intrinsic ABC protein 7 [detail] 820236
6.6 AT3G10350 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820197
Coexpressed
gene list		 [Coexpressed gene list for CLPP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262823_at
262823_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262823_at
262823_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262823_at
262823_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837719      
Refseq ID (protein) NP_001184966.1 
NP_563893.1 


The preparation time of this page was 0.1 [sec].