[←][→] ath   AT1G12370 Gene
functional annotation
Function   photolyase 1  
GO BP
GO:0000719 [list] [network] photoreactive repair  (3 genes)  IBA IMP  
GO:0009650 [list] [network] UV protection  (5 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003904 [list] [network] deoxyribodipyrimidine photo-lyase activity  (1 genes)  IEA  
GO:0003913 [list] [network] DNA photolyase activity  (4 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_001321694.1  NP_563906.1  NP_849651.1 
BLAST NP_001321694.1  NP_563906.1  NP_849651.1 
Orthologous [Ortholog page] LOC9272017 (osa)  LOC11429370 (mtr)  PHR (gma)  LOC100191679 (zma)  LOC100243038 (vvi)  LOC101262840 (sly)  LOC103836167 (bra) 
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_001321694.1)
chlo 4,  mito 2,  nucl 2,  cyto_mito 1,  cyto 1  (predict for NP_563906.1)
chlo 3,  mito 2,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_849651.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001321694.1)
other 7,  mito 4  (predict for NP_563906.1)
other 7,  mito 4  (predict for NP_849651.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath00941 Flavonoid biosynthesis 2
ath00902 Monoterpenoid biosynthesis 2
Genes directly connected with PHR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 AT2G25530 AFG1-like ATPase family protein [detail] 817091
9.1 ABCI21 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 834434
8.9 NUDX19 nudix hydrolase homolog 19 [detail] 832129
8.7 CRY3 cryptochrome 3 [detail] 832554
4.8 SDR2 NAD(P)-binding Rossmann-fold superfamily protein [detail] 816953
Coexpressed
gene list		 [Coexpressed gene list for PHR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259537_at
259537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259537_at
259537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259537_at
259537_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837792      
Refseq ID (protein) NP_001321694.1 
NP_563906.1 
NP_849651.1 


The preparation time of this page was 0.2 [sec].