[←][→] ath   AT1G12650 Gene
functional annotation
Function   rRNA biogenesis RRP36-like protein  
GO BP
GO:0000469 [list] [network] cleavage involved in rRNA processing  (17 genes)  IEA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IBA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (20 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001031031.1  NP_001077524.1  NP_001077525.1  NP_172725.2 
BLAST NP_001031031.1  NP_001077524.1  NP_001077525.1  NP_172725.2 
Orthologous [Ortholog page] LOC4347627 (osa)  LOC7476079 (ppo)  LOC11442249 (mtr)  LOC25496690 (mtr)  LOC100246112 (vvi)  LOC100282587 (zma)  LOC100779255 (gma)  LOC100804672 (gma)  LOC101256597 (sly)  LOC103843114 (bra)  LOC109941184 (zma) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001031031.1)
nucl 10  (predict for NP_001077524.1)
nucl 10  (predict for NP_001077525.1)
nucl 10  (predict for NP_172725.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001031031.1)
other 8  (predict for NP_001077524.1)
other 8  (predict for NP_001077525.1)
other 8  (predict for NP_172725.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT1G12650 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT5G05210 Surfeit locus protein 6 [detail] 830403
9.1 AT2G40430 Nop53 protein [detail] 818636
8.5 AT5G06110 DnaJ and myb-like DNA-binding domain-containing protein [detail] 830498
8.4 AT4G03180 rRNA-processing protein [detail] 828047
7.8 AT5G49400 zinc knuckle (CCHC-type) family protein [detail] 835000
7.2 PDF2 prefoldin 2 [detail] 821819
5.7 AT1G64490 DEK, chromatin associated protein [detail] 842757
Coexpressed
gene list		 [Coexpressed gene list for AT1G12650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255929_at
255929_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255929_at
255929_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255929_at
255929_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837821      
Refseq ID (protein) NP_001031031.1 
NP_001077524.1 
NP_001077525.1 
NP_172725.2 


The preparation time of this page was 0.1 [sec].