[←][→] ath   At1g12790 Gene
functional annotation
Function   DNA ligase-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010845 [list] [network] positive regulation of reciprocal meiotic recombination  (1 genes)  IMP  
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (6 genes)  IMP  
GO:0007140 [list] [network] male meiotic nuclear division  (28 genes)  IMP  
GO:0048236 [list] [network] plant-type sporogenesis  (38 genes)  IMP  
GO:0007131 [list] [network] reciprocal meiotic recombination  (41 genes)  IMP  
GO:0007059 [list] [network] chromosome segregation  (77 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_563913.1 
BLAST NP_563913.1 
Orthologous [Ortholog page] LOC4339770 (osa)  LOC7459110 (ppo)  LOC11424226 (mtr)  LOC100780115 (gma)  LOC100786486 (gma)  LOC101260831 (sly)  LOC103871981 (bra)  LOC123040465 (tae)  LOC123048556 (tae)  LOC123184593 (tae)  LOC123424586 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  extr 1,  cysk_nucl 1  (predict for NP_563913.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_563913.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00640 Propanoate metabolism 4
Genes directly connected with AT1G12790 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.5 AT1G01770 propionyl-CoA carboxylase [detail] 837323
4.2 GCN2 protein kinase family protein [detail] 825110
4.1 BCDH BETA1 branched-chain alpha-keto acid decarboxylase E1 beta subunit [detail] 841998
Coexpressed
gene list		 [Coexpressed gene list for AT1G12790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261205_at
261205_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261205_at
261205_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261205_at
261205_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837835      
Refseq ID (protein) NP_563913.1 


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