| functional annotation |
| Function |
sec7 domain-containing protein |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0048209 [list] [network] regulation of vesicle targeting, to, from or within Golgi
|
(1 genes)
|
TAS
|
 |
|
GO:0001736 [list] [network] establishment of planar polarity
|
(3 genes)
|
IGI
|
|
|
GO:0032012 [list] [network] regulation of ARF protein signal transduction
|
(8 genes)
|
IEA
|
|
|
GO:0009942 [list] [network] longitudinal axis specification
|
(9 genes)
|
IMP
|
|
|
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway
|
(13 genes)
|
IMP
|
|
|
GO:0007155 [list] [network] cell adhesion
|
(14 genes)
|
IMP
|
|
|
GO:0010540 [list] [network] basipetal auxin transport
|
(15 genes)
|
IMP
|
|
|
GO:0009880 [list] [network] embryonic pattern specification
|
(26 genes)
|
IMP
|
|
|
GO:0006897 [list] [network] endocytosis
|
(33 genes)
|
IMP
|
|
|
GO:0070417 [list] [network] cellular response to cold
|
(38 genes)
|
IDA
|
|
|
GO:0010311 [list] [network] lateral root formation
|
(59 genes)
|
IMP
|
|
|
GO:0000911 [list] [network] cytokinesis by cell plate formation
|
(70 genes)
|
IMP
|
|
|
GO:0048765 [list] [network] root hair cell differentiation
|
(143 genes)
|
IGI
|
|
|
GO:0010087 [list] [network] phloem or xylem histogenesis
|
(158 genes)
|
IMP
|
|
|
GO:0016192 [list] [network] vesicle-mediated transport
|
(261 genes)
|
IMP
|
|
|
GO:0071555 [list] [network] cell wall organization
|
(288 genes)
|
IMP
|
|
|
GO:0009826 [list] [network] unidimensional cell growth
|
(356 genes)
|
IMP
|
|
|
GO:0009793 [list] [network] embryo development ending in seed dormancy
|
(697 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
GO:0010292 [list] [network] GTP:GDP antiporter activity
|
(1 genes)
|
IGI
|
|
|
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity
|
(24 genes)
|
IDA
|
|
|
GO:0042803 [list] [network] protein homodimerization activity
|
(227 genes)
|
IPI
|
|
|
GO:0042802 [list] [network] identical protein binding
|
(404 genes)
|
IPI
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
ath04144 [list] [network] Endocytosis (158 genes) |
 |
| Protein |
NP_001184991.1
NP_172851.1
|
| BLAST |
NP_001184991.1
NP_172851.1
|
| Orthologous |
[Ortholog page]
LOC4329190 (osa)
LOC9271296 (osa)
LOC11438427 (mtr)
LOC18107296 (ppo)
LOC18107297 (ppo)
LOC25489342 (mtr)
LOC25489344 (mtr)
LOC100780239 (gma)
LOC100784083 (gma)
LOC100789153 (gma)
LOC100789674 (gma)
LOC100802024 (gma)
LOC100811766 (gma)
LOC101246883 (sly)
LOC101248166 (sly)
LOC101249543 (sly)
LOC101259044 (sly)
LOC103872089 (bra)
LOC123090610 (tae)
LOC123095646 (tae)
LOC123104808 (tae)
LOC123122610 (tae)
LOC123447007 (hvu)
LOC123451977 (hvu)
|
Subcellular
localization
wolf |
|
cyto 4,
nucl 2,
plas 2,
nucl_plas 2
|
(predict for NP_001184991.1)
|
|
cyto 4,
nucl 2,
plas 2,
nucl_plas 2
|
(predict for NP_172851.1)
|
|
Subcellular
localization
TargetP |
|
other 9
|
(predict for NP_001184991.1)
|
|
other 9
|
(predict for NP_172851.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04144 |
Endocytosis |
4 |
 |
Genes directly connected with GN on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 8.3 |
AT3G60860 |
SEC7-like guanine nucleotide exchange family protein |
[detail] |
825257 |
| 8.2 |
AT5G65950 |
trafficking protein particle complex subunit-like protein |
[detail] |
836725 |
| 7.7 |
AT5G15680 |
ARM repeat superfamily protein |
[detail] |
831422 |
| 5.3 |
PHYA |
phytochrome A |
[detail] |
837483 |
|
Coexpressed
gene list |
[Coexpressed gene list for GN]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
262614_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
262614_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
262614_at
X axis is samples (xls file), and Y axis is log-expression.
|
At1g13980 Gene
