functional annotation |
Function |
PsbQ-like 2 |
|
GO BP |
GO:0009767 [list] [network] photosynthetic electron transport chain
|
(35 genes)
|
IBA
IMP
|
|
|
GO CC |
GO:0009344 [list] [network] nitrite reductase complex [NAD(P)H]
|
(2 genes)
|
IMP
|
|
GO:0009654 [list] [network] photosystem II oxygen evolving complex
|
(21 genes)
|
IEA
|
|
GO:0009543 [list] [network] chloroplast thylakoid lumen
|
(59 genes)
|
TAS
|
|
GO:0019898 [list] [network] extrinsic component of membrane
|
(62 genes)
|
IEA
|
|
GO:0009535 [list] [network] chloroplast thylakoid membrane
|
(373 genes)
|
IDA
|
|
GO:0009534 [list] [network] chloroplast thylakoid
|
(474 genes)
|
IDA
|
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
IBA
IDA
ISM
|
|
|
GO MF |
GO:0045156 [list] [network] electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
|
(6 genes)
|
IBA
IMP
|
|
GO:0005509 [list] [network] calcium ion binding
|
(242 genes)
|
IEA
|
|
|
KEGG |
ath00195 [list] [network] Photosynthesis (76 genes) |
|
Protein |
NP_563937.1
NP_973820.1
|
BLAST |
NP_563937.1
NP_973820.1
|
Orthologous |
[Ortholog page]
LOC4329766 (osa)
LOC7492927 (ppo)
LOC11413262 (mtr)
LOC100243071 (vvi)
LOC100807480 (gma)
LOC101245163 (sly)
LOC103627333 (zma)
LOC103653672 (zma)
LOC103842995 (bra)
LOC103872111 (bra)
|
Subcellular localization wolf |
chlo 5,
nucl 2,
cyto_nucl 1,
mito 1
|
(predict for NP_563937.1)
|
chlo 5,
mito 2,
nucl 1,
cyto_nucl 1
|
(predict for NP_973820.1)
|
|
Subcellular localization TargetP |
chlo 4,
mito 3
|
(predict for NP_563937.1)
|
chlo 4,
mito 3
|
(predict for NP_973820.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00195 |
Photosynthesis |
2 |
|
Genes directly connected with PnsL2 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
13.9 |
NdhL |
inorganic carbon transport protein-like protein |
[detail] |
843413 |
12.7 |
NdhN |
oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor |
[detail] |
835938 |
10.6 |
PnsL1 |
PsbP-like protein 2 |
[detail] |
818532 |
10.0 |
PnsB3 |
NDH-dependent cyclic electron flow 1 |
[detail] |
820871 |
9.3 |
CP12-2 |
CP12 domain-containing protein 2 |
[detail] |
825414 |
8.5 |
CRR42 |
DUF3148 family protein |
[detail] |
832218 |
7.8 |
AT1G27480 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
839639 |
7.6 |
PnsB2 |
NDH-dependent cyclic electron flow 1 |
[detail] |
842785 |
7.5 |
AT4G12830 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
826895 |
7.3 |
SIG4 |
sigma factor 4 |
[detail] |
831218 |
3.5 |
MES8 |
methyl esterase 8 |
[detail] |
816891 |
|
Coexpressed gene list |
[Coexpressed gene list for PnsL2]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
262612_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
262612_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
262612_at
X axis is samples (xls file), and Y axis is log-expression.
|