[←][→] ath   AT1G14420 Gene
functional annotation
Function   Pectate lyase family protein  
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO:0009664 [list] [network] plant-type cell wall organization  (145 genes)  TAS  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  ISS  
GO:0016829 [list] [network] lyase activity  (412 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_172894.1 
BLAST NP_172894.1 
Orthologous [Ortholog page] LOC542245 (zma)  AT2G02720 (ath)  AT3G01270 (ath)  AT5G15110 (ath)  LOC4328714 (osa)  LOC4340099 (osa)  LOC4340103 (osa)  LOC4340105 (osa)  LOC4341389 (osa)  LOC7457856 (ppo)  LOC7472610 (ppo)  LOC7495953 (ppo)  LOC11406962 (mtr)  LOC11416043 (mtr)  LOC11438708 (mtr)  LOC25495277 (mtr)  LOC25502784 (mtr)  LOC100254377 (vvi)  LOC100257069 (vvi)  LOC100262177 (vvi)  LOC100267345 (vvi)  LOC100284055 (zma)  LOC100284356 (zma)  LOC100780236 (gma)  LOC100785801 (gma)  LOC100796307 (gma)  LOC100798579 (gma)  LOC100801864 (gma)  LOC100810615 (gma)  LOC100810857 (gma)  LOC101246909 (sly)  LOC101249735 (sly)  LOC101250914 (sly)  LAT59 (sly)  LOC101260096 (sly)  LOC101264694 (sly)  LOC103827511 (bra)  LOC103836073 (bra)  LOC103839439 (bra)  LOC103842969 (bra)  LOC103846441 (bra)  LOC103850082 (bra)  LOC103850968 (bra)  LOC103853982 (bra)  LOC103856110 (bra)  LOC103858923 (bra)  LOC103872235 (bra)  LOC107275230 (zma) 
Subcellular
localization
wolf
E.R. 3,  vacu 2,  extr 1,  golg 1,  E.R._plas 1  (predict for NP_172894.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_172894.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT59 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 CPK24 calcium-dependent protein kinase 24 [detail] 817708
8.7 RALFL25 ralf-like 25 [detail] 822108
8.3 APPB1 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 828566
7.5 AT3G20530 Protein kinase superfamily protein [detail] 821599
7.5 PRK4 Leucine-rich repeat protein kinase family protein [detail] 821563
Coexpressed
gene list		 [Coexpressed gene list for AT59]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261528_at
261528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261528_at
261528_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261528_at
261528_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838004      
Refseq ID (protein) NP_172894.1 


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