ATTED-II : GeneID search result

[←][→] ath At1g14920 Gene

functional annotation

Function

GRAS family transcription factor family protein

GO BP

GO:0006808 [list] [network] regulation of nitrogen utilization	(4 genes)	IMP
GO:0010336 [list] [network] gibberellic acid homeostasis	(7 genes)	IDA
GO:0009939 [list] [network] positive regulation of gibberellic acid mediated signaling pathway	(9 genes)	IDA
GO:0033206 [list] [network] meiotic cytokinesis	(9 genes)	IMP
GO:2000033 [list] [network] regulation of seed dormancy process	(14 genes)	IEP IGI
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway	(15 genes)	IMP TAS
GO:0010233 [list] [network] phloem transport	(22 genes)	IMP
GO:0010187 [list] [network] negative regulation of seed germination	(27 genes)	IGI
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway	(42 genes)	TAS
GO:0010218 [list] [network] response to far red light	(48 genes)	IEP
GO:0042538 [list] [network] hyperosmotic salinity response	(58 genes)	IGI
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process	(63 genes)	IGI
GO:0009863 [list] [network] salicylic acid mediated signaling pathway	(77 genes)	IGI
GO:0010029 [list] [network] regulation of seed germination	(93 genes)	IEP IGI
GO:0009739 [list] [network] response to gibberellin	(116 genes)	IEP
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway	(147 genes)	IGI
GO:0009723 [list] [network] response to ethylene	(241 genes)	IGI
GO:1903508 [list] [network] positive regulation of nucleic acid-templated transcription	(274 genes)	IDA
GO:0009651 [list] [network] response to salt stress	(607 genes)	IGI
GO:0009737 [list] [network] response to abscisic acid	(1086 genes)	IGI

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

IDA ISM ISS TAS

GO MF

GO:0003713 [list] [network] transcription coactivator activity	(19 genes)	IDA
GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS TAS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

ath04075 [list] [network] Plant hormone signal transduction (291 genes)

Protein

NP_172945.1

BLAST

NP_172945.1

Orthologous

[Ortholog page] GAI (sly) GAI1 (gma) GAI2 (gma) RGA1 (ath) RGL2 (ath) RGL3 (ath) RGL1 (ath) LOC4333860 (osa) LOC7475521 (ppo) LOC7482891 (ppo) LOC7493546 (ppo) LOC18099385 (ppo) LOC25489240 (mtr) LOC100797336 (gma) LOC100799695 (gma) LOC103827572 (bra) LOC103833178 (bra) LOC103839478 (bra) LOC103852324 (bra) LOC103855161 (bra) LOC120577405 (mtr) LOC123087136 (tae) LOC123090825 (tae) LOC123095833 (tae) LOC123447390 (hvu)

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4

(predict for NP_172945.1)

Subcellular
localization
TargetP

other 9

(predict for NP_172945.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	6

Genes directly connected with GAI on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.9	RGA1	GRAS family transcription factor family protein	[detail]	814686
5.5	BRI1	Leucine-rich receptor-like protein kinase family protein	[detail]	830095
5.2	AT1G09250	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[detail]	837446
5.1	RGL1	RGA-like 1	[detail]	842953

Coexpressed
gene list

[Coexpressed gene list for GAI]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262850_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262850_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262850_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838057
Refseq ID (protein)	NP_172945.1

The preparation time of this page was 1.8 [sec].