[←][→] ath   At1g15820 Gene
functional annotation
Function   light harvesting complex photosystem II subunit 6      
GO BP
GO:0010196 [list] [network] nonphotochemical quenching  (16 genes)  IMP  
GO:0015979 [list] [network] photosynthesis  (167 genes)  IMP NAS  
GO CC
GO:0009783 [list] [network] photosystem II antenna complex  (2 genes)  NAS  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (21 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_173034.1 
BLAST NP_173034.1 
Orthologous [Ortholog page] LOC4336028 (osa)  LOC7473011 (ppo)  LOC7480776 (ppo)  LOC11430346 (mtr)  LOC100500118 (gma)  LOC100527463 (gma)  LOC100783223 (gma)  LHCP (sly)  CAB-10A (sly)  LOC103836017 (bra)  LOC103842881 (bra)  LOC103872378 (bra)  LOC123053510 (tae)  LOC123189406 (tae)  LOC123426891 (hvu) 
Subcellular
localization
wolf
chlo 9,  cyto 1  (predict for NP_173034.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_173034.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00196 Photosynthesis - antenna proteins 9
Genes directly connected with LHCB6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
21.1 LHCB3 light-harvesting chlorophyll B-binding protein 3 [detail] 835515
18.2 LHCA1 chlorophyll a-b binding protein 6 [detail] 824654
17.8 PSAO photosystem I subunit O [detail] 837358
16.9 LHCB4.2 light harvesting complex photosystem II [detail] 820043
16.5 PSAH2 photosystem I subunit H2 [detail] 841653
13.1 AT1G21500 uncharacterized protein [detail] 838749
Coexpressed
gene list		 [Coexpressed gene list for LHCB6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259491_at
259491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259491_at
259491_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259491_at
259491_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838151      
Refseq ID (protein) NP_173034.1 


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