| functional annotation |
| Function |
Serinc-domain containing serine and sphingolipid biosynthesis protein |
|
| GO BP |
|
| GO CC |
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
 |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001185008.1
NP_173069.1
|
| BLAST |
NP_001185008.1
NP_173069.1
|
| Orthologous |
[Ortholog page]
LOC4330983 (osa)
LOC25498411 (mtr)
LOC100191588 (zma)
LOC100262087 (vvi)
LOC100784295 (gma)
LOC100798110 (gma)
LOC101252268 (sly)
LOC103836002 (bra)
|
Subcellular
localization
wolf |
|
cyto 3,
plas 2,
cyto_E.R. 2,
chlo 1,
vacu 1,
E.R. 1,
cyto_nucl 1,
E.R._vacu 1,
cyto_pero 1,
cysk_plas 1
|
(predict for NP_001185008.1)
|
|
cyto 3,
plas 2,
cyto_E.R. 2,
chlo 1,
vacu 1,
E.R. 1,
cyto_nucl 1,
E.R._vacu 1,
cyto_pero 1,
cysk_plas 1
|
(predict for NP_173069.1)
|
|
Subcellular
localization
TargetP |
|
scret 6,
chlo 3
|
(predict for NP_001185008.1)
|
|
scret 6,
chlo 3
|
(predict for NP_173069.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00564 |
Glycerophospholipid metabolism |
2 |
 |
Genes directly connected with AT1G16180 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 9.3 |
AT3G30390 |
Transmembrane amino acid transporter family protein |
[detail] |
822740 |
| 8.0 |
PTR2 |
peptide transporter 2 |
[detail] |
814735 |
| 7.9 |
AT3G06170 |
Serinc-domain containing serine and sphingolipid biosynthesis protein |
[detail] |
819791 |
| 7.6 |
SAG18 |
senescence associated gene 18 |
[detail] |
843459 |
| 7.4 |
GPAT9 |
glycerol-3-phosphate acyltransferase 9 |
[detail] |
836183 |
| 7.0 |
RBL15 |
RHOMBOID-like protein 15 |
[detail] |
825015 |
| 7.0 |
AT4G28770 |
Tetraspanin family protein |
[detail] |
828998 |
| 6.4 |
NBR1 |
ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein |
[detail] |
828571 |
| 6.1 |
AT5G21090 |
Leucine-rich repeat (LRR) family protein |
[detail] |
832233 |
| 6.1 |
ENT1 |
equilibrative nucleotide transporter 1 |
[detail] |
843369 |
| 6.0 |
CAT4 |
cationic amino acid transporter 4 |
[detail] |
821176 |
| 5.6 |
AT4G06676 |
etoposide-induced protein |
[detail] |
826112 |
| 5.4 |
RIE1 |
RING-finger protein for embryogenesi |
[detail] |
814703 |
| 5.4 |
NPC1 |
non-specific phospholipase C1 |
[detail] |
837234 |
| 5.2 |
SIP2;1 |
small and basic intrinsic protein 2;1 |
[detail] |
824862 |
| 4.3 |
APS4 |
Pseudouridine synthase/archaeosine transglycosylase-like family protein |
[detail] |
834400 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G16180]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
261843_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
261843_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
261843_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G16180 Gene
