[←][→] ath   AT1G16240 Gene
functional annotation
Function   syntaxin of plants 51  
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  TAS  
GO CC
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IEA  
GO:0010008 [list] [network] endosome membrane  (162 genes)  NAS TAS  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IEA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  TAS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (44 genes)
Protein NP_001031054.1  NP_001077546.1  NP_001323228.1  NP_563994.1 
BLAST NP_001031054.1  NP_001077546.1  NP_001323228.1  NP_563994.1 
Orthologous [Ortholog page] SYP52 (ath)  LOC4328103 (osa)  LOC4345157 (osa)  LOC7479643 (ppo)  LOC11445318 (mtr)  LOC25500903 (mtr)  LOC100193337 (zma)  LOC100217094 (zma)  LOC100250369 (vvi)  LOC100782666 (gma)  LOC100794038 (gma)  LOC100799465 (gma)  LOC101252340 (sly)  LOC101262735 (sly)  LOC103832523 (bra)  LOC103842859 (bra)  LOC103853203 (bra)  LOC103872414 (bra)  LOC104878462 (vvi) 
Subcellular
localization
wolf
golg 4,  chlo 2,  plas 1,  cyto 1,  nucl_plas 1  (predict for NP_001031054.1)
nucl 4,  nucl_plas 3,  cyto 2,  chlo 1,  cyto_pero 1  (predict for NP_001077546.1)
golg 4,  chlo 2,  plas 1,  cyto 1,  nucl_plas 1  (predict for NP_001323228.1)
golg 4,  chlo 2,  plas 1,  cyto 1,  nucl_plas 1  (predict for NP_563994.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001031054.1)
other 5,  chlo 4  (predict for NP_001077546.1)
other 5,  chlo 4  (predict for NP_001323228.1)
other 5,  chlo 4  (predict for NP_563994.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 6
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with SYP51 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 ATI1 mesoderm induction early response protein [detail] 819206
7.6 AT5G32440 Ubiquitin system component Cue protein [detail] 833203
7.6 SYP52 syntaxin of plants 52 [detail] 844297
7.4 ISI1 binding protein [detail] 828889
7.1 BPC4 basic pentacysteine 4 [detail] 816663
7.1 RHA1 Ras small GTP-binding family protein [detail] 834549
6.5 RTH RTE1-homolog [detail] 824268
5.6 AT1G53400 Ubiquitin domain-containing protein [detail] 841776
4.8 GGP3 Class I glutamine amidotransferase-like superfamily protein [detail] 829178
Coexpressed
gene list		 [Coexpressed gene list for SYP51]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262709_at
262709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262709_at
262709_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262709_at
262709_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838193      
Refseq ID (protein) NP_001031054.1 
NP_001077546.1 
NP_001323228.1 
NP_563994.1 


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