[←][→] ath   AT1G17745 Gene
functional annotation
Function   D-3-phosphoglycerate dehydrogenase  
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (7 genes)  IEA TAS  
GO:0006520 [list] [network] cellular amino acid metabolic process  (369 genes)  IBA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IDA  
GO MF
GO:0004617 [list] [network] phosphoglycerate dehydrogenase activity  (6 genes)  IBA IGI  
GO:0051287 [list] [network] NAD binding  (66 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001031061.2  NP_564034.1 
BLAST NP_001031061.2  NP_564034.1 
Orthologous [Ortholog page] AT3G19480 (ath)  EDA9 (ath)  LOC4337230 (osa)  LOC4341713 (osa)  LOC4345710 (osa)  LOC7490861 (ppo)  LOC7491573 (ppo)  LOC7492063 (ppo)  LOC11434383 (mtr)  LOC25485421 (mtr)  LOC100241666 (vvi)  LOC100259056 (vvi)  LOC100260655 (vvi)  LOC100280688 (zma)  LOC100280735 (zma)  LOC100281928 (zma)  LOC100793819 (gma)  LOC100808771 (gma)  LOC100817949 (gma)  LOC100819264 (gma)  LOC101246616 (sly)  LOC101254848 (sly)  LOC101266918 (sly)  LOC103645840 (zma)  LOC103834426 (bra)  LOC103835943 (bra)  LOC103840754 (bra)  LOC103859810 (bra)  LOC103862328 (bra) 
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_001031061.2)
chlo 7,  mito 2,  cyto_mito 1  (predict for NP_564034.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001031061.2)
chlo 8  (predict for NP_564034.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath01200 Carbon metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath00270 Cysteine and methionine metabolism 4
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
Genes directly connected with PGDH on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 PSAT phosphoserine aminotransferase [detail] 829715
5.5 LAP1 Cytosol aminopeptidase family protein [detail] 816954
5.1 GSTF10 glutathione S-transferase PHI 10 [detail] 817637
Coexpressed
gene list		 [Coexpressed gene list for PGDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259403_at
259403_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259403_at
259403_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259403_at
259403_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838352      
Refseq ID (protein) NP_001031061.2 
NP_564034.1 


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