[←][→] ath   At1g17745 Gene
functional annotation
Function   D-3-phosphoglycerate dehydrogenase      
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (6 genes)  TAS  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0004617 [list] [network] phosphoglycerate dehydrogenase activity  (2 genes)  IGI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001031061.2  NP_564034.1 
BLAST NP_001031061.2  NP_564034.1 
Orthologous [Ortholog page] AT3G19480 (ath)  EDA9 (ath)  LOC4337230 (osa)  LOC4341713 (osa)  LOC4345710 (osa)  LOC7472681 (ppo)  LOC7490061 (ppo)  LOC7490861 (ppo)  LOC7491573 (ppo)  LOC7492063 (ppo)  LOC11434383 (mtr)  LOC18104837 (ppo)  LOC25485421 (mtr)  LOC100793819 (gma)  LOC100808771 (gma)  LOC100817949 (gma)  LOC100819264 (gma)  LOC101246616 (sly)  LOC101254848 (sly)  LOC101266918 (sly)  LOC103834426 (bra)  LOC103835943 (bra)  LOC103840754 (bra)  LOC103859810 (bra)  LOC103862328 (bra)  LOC123047083 (tae)  LOC123054906 (tae)  LOC123128760 (tae)  LOC123138775 (tae)  LOC123159608 (tae)  LOC123166656 (tae)  LOC123181697 (tae)  LOC123190747 (tae)  LOC123396582 (hvu)  LOC123400465 (hvu)  LOC123408590 (hvu)  LOC123428120 (hvu)  LOC123439600 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_001031061.2)
chlo 7,  mito 2,  cyto_mito 1  (predict for NP_564034.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001031061.2)
chlo 8  (predict for NP_564034.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00270 Cysteine and methionine metabolism 6
ath01200 Carbon metabolism 6
ath01230 Biosynthesis of amino acids 6
ath00480 Glutathione metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
Genes directly connected with PGDH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.4 PSAT phosphoserine aminotransferase [detail] 829715
5.7 LAP1 Cytosol aminopeptidase family protein [detail] 816954
5.6 GGT4 gamma-glutamyl transpeptidase 4 [detail] 829042
4.6 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein [detail] 828975
3.4 AT4G19975 nucleotide-diphospho-sugar transferase family protein [detail] 28720150
Coexpressed
gene list		 [Coexpressed gene list for PGDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259403_at
259403_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259403_at
259403_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259403_at
259403_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838352      
Refseq ID (protein) NP_001031061.2 
NP_564034.1 


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