[←][→] ath   AT1G18340 Gene
functional annotation
Function   basal transcription factor complex subunit-like protein  
GO BP
GO:0070816 [list] [network] phosphorylation of RNA polymerase II C-terminal domain  (15 genes)  IBA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IBA  
GO CC
GO:0000439 [list] [network] transcription factor TFIIH core complex  (8 genes)  IBA  
GO:0005675 [list] [network] transcription factor TFIIH holo complex  (15 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (26 genes)  IBA  
GO:0008094 [list] [network] DNA-dependent ATPase activity  (82 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
Protein NP_564050.1 
BLAST NP_564050.1 
Orthologous [Ortholog page] LOC4328152 (osa)  LOC11419054 (mtr)  LOC100192494 (zma)  LOC100253978 (vvi)  LOC100776751 (gma)  LOC100810574 (gma)  LOC101258663 (sly)  LOC103835909 (bra)  LOC103872598 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  extr 1,  cyto_plas 1  (predict for NP_564050.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for NP_564050.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G18340 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT1G18335 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 838414
5.6 AT1G34350 Tmem18 [detail] 840336
5.4 TMN6 Endomembrane protein 70 protein family [detail] 841956
Coexpressed
gene list		 [Coexpressed gene list for AT1G18340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261671_at
261671_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261671_at
261671_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261671_at
261671_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838415      
Refseq ID (protein) NP_564050.1 


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