ATTED-II : GeneID search result

[←][→] ath At1g19290 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0000963 [list] [network] mitochondrial RNA processing	(24 genes)	IMP
GO:0008380 [list] [network] RNA splicing	(191 genes)	IMP

GO CC

GO:0005739 [list] [network] mitochondrion

(4228 genes)

IDA ISM

GO MF

KEGG

Protein

NP_001319043.1 NP_173362.2

BLAST

NP_001319043.1 NP_173362.2

Orthologous

[Ortholog page] LOC9271043 (osa) LOC11418300 (mtr) LOC18104994 (ppo) LOC100811926 (gma) LOC101265435 (sly) LOC102659832 (gma) LOC103835853 (bra) LOC123131956 (tae) LOC123135979 (tae) LOC123143471 (tae) LOC123404110 (hvu)

Subcellular
localization
wolf

chlo 6, chlo_mito 4, extr 1, mito 1	(predict for NP_001319043.1)
chlo 6, chlo_mito 4, extr 1, mito 1	(predict for NP_173362.2)

Subcellular
localization
TargetP

mito 9	(predict for NP_001319043.1)
mito 9	(predict for NP_173362.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G19290 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.7	AT5G14770	PPR repeat protein	[detail]	831329
9.1	AT5G46100	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	834651
8.5	AT1G06710	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	837181

Coexpressed
gene list

[Coexpressed gene list for AT1G19290]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260654_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260654_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260654_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838511
Refseq ID (protein)	NP_001319043.1
Refseq ID (protein)	NP_173362.2

The preparation time of this page was 0.6 [sec].