[←][→] ath   At1g20370 Gene
functional annotation
Function   Pseudouridine synthase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IEA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IEA  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  TAS  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IEA  
KEGG
Protein NP_564112.1 
BLAST NP_564112.1 
Orthologous [Ortholog page] AT1G76120 (ath)  LOC4330262 (osa)  LOC7485628 (ppo)  LOC7490609 (ppo)  LOC11440088 (mtr)  LOC11442694 (mtr)  LOC100778978 (gma)  LOC100811976 (gma)  LOC101250299 (sly)  LOC103832059 (bra)  LOC103872832 (bra)  LOC123127959 (tae)  LOC123137671 (tae)  LOC123145056 (tae)  LOC123401341 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_564112.1)
Subcellular
localization
TargetP
other 9  (predict for NP_564112.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with AT1G20370 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT5G39900 Small GTP-binding protein [detail] 833987
8.2 RH36 RNA helicase 36 [detail] 838197
8.2 AT4G28200 U3 small nucleolar RNA-associated-like protein [detail] 828935
7.3 AT3G26850 histone-lysine N-methyltransferase [detail] 822300
Coexpressed
gene list		 [Coexpressed gene list for AT1G20370]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255887_at
255887_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255887_at
255887_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255887_at
255887_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838625      
Refseq ID (protein) NP_564112.1 


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