[←][→] ath   At1g20696 Gene
functional annotation
Function   high mobility group B3      
GO BP
GO CC
GO:0000785 [list] [network] chromatin  (135 genes)  TAS  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (16 genes)  TAS  
GO:0003682 [list] [network] chromatin binding  (105 genes)  TAS  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001031075.1  NP_001077570.2  NP_001322266.1  NP_001322267.1  NP_564124.1 
BLAST NP_001031075.1  NP_001077570.2  NP_001322266.1  NP_001322267.1  NP_564124.1 
Orthologous [Ortholog page] LOC547975 (gma)  HMGB4 (ath)  HMGB5 (ath)  HMGB2 (ath)  LOC4347789 (osa)  LOC7480462 (ppo)  LOC7494705 (ppo)  LOC7496853 (ppo)  LOC11407325 (mtr)  LOC25490320 (mtr)  LOC25501590 (mtr)  LOC100305957 (gma)  LOC100500173 (gma)  LOC101257131 (sly)  LOC101264099 (sly)  LOC103829416 (bra)  LOC103835781 (bra)  LOC103837811 (bra)  LOC103845936 (bra)  LOC103862419 (bra)  LOC103872857 (bra)  LOC123067823 (tae)  LOC123104735 (tae)  LOC123113020 (tae)  LOC123122536 (tae)  LOC123397883 (hvu) 
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for NP_001031075.1)
nucl 6,  cyto 1,  extr 1  (predict for NP_001077570.2)
chlo 4,  nucl 4,  cyto 1,  golg 1  (predict for NP_001322266.1)
chlo 4,  nucl 3,  cyto 1,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001322267.1)
nucl 10  (predict for NP_564124.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_001031075.1)
other 9  (predict for NP_001077570.2)
chlo 6,  other 4  (predict for NP_001322266.1)
other 9  (predict for NP_001322267.1)
chlo 6,  other 3  (predict for NP_564124.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HMGB3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.3 HMGB2 high mobility group B2 [detail] 838658
8.8 AT4G40040 Histone superfamily protein [detail] 830165
7.5 AT1G47970 nucleolin [detail] 841215
Coexpressed
gene list		 [Coexpressed gene list for HMGB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256092_at
256092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256092_at
256092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256092_at
256092_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838659      
Refseq ID (protein) NP_001031075.1 
NP_001077570.2 
NP_001322266.1 
NP_001322267.1 
NP_564124.1 


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