[←][→] ath   AT1G22960 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO MF
KEGG
Protein NP_001319064.1  NP_001320434.1 
BLAST NP_001319064.1  NP_001320434.1 
Orthologous [Ortholog page] AT5G25630 (ath)  LOC4351524 (osa)  LOC11417028 (mtr)  LOC11428551 (mtr)  LOC25496755 (mtr)  LOC25496756 (mtr)  LOC25497366 (mtr)  LOC100254230 (vvi)  LOC100779660 (gma)  LOC100783041 (gma)  LOC100787792 (gma)  LOC100804053 (gma)  LOC101266332 (sly)  LOC102663951 (gma)  LOC103626265 (zma)  LOC103633291 (zma)  LOC103640378 (zma)  LOC103640761 (zma)  LOC103642700 (zma)  LOC103644101 (zma)  LOC103649522 (zma)  LOC103651688 (zma)  LOC103651729 (zma)  LOC103654346 (zma)  LOC103655674 (zma)  LOC103656055 (zma)  LOC103832941 (bra)  LOC103840808 (bra)  LOC107277127 (osa)  LOC109939365 (zma)  LOC109940796 (zma)  LOC109941136 (zma)  LOC109942479 (zma)  LOC109942889 (zma)  LOC111591175 (zma) 
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001319064.1)
chlo 6,  mito 4  (predict for NP_001320434.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001319064.1)
mito 8  (predict for NP_001320434.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G22960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827685
9.0 AT1G79540 Pentatricopeptide repeat (PPR) superfamily protein [detail] 844292
8.1 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein [detail] 843461
7.9 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein [detail] 815153
7.8 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836682
7.0 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817629
6.9 AT1G11630 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837707
6.8 AT3G04130 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819568
5.8 AT1G66345 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842952
5.8 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 832552
5.7 AT5G03100 F-box/RNI-like superfamily protein [detail] 831808
5.6 AT1G64580 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842766
5.5 ABC1 ABC transporter 1 [detail] 828127
Coexpressed
gene list		 [Coexpressed gene list for AT1G22960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264723_at
264723_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264723_at
264723_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264723_at
264723_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838903      
Refseq ID (protein) NP_001319064.1 
NP_001320434.1 


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