[←][→] ath   AT1G23980 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IEA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_173809.1 
BLAST NP_173809.1 
Orthologous [Ortholog page] AT5G40250 (ath)  LOC4330698 (osa)  LOC4340585 (osa)  LOC7483485 (ppo)  LOC7496654 (ppo)  LOC11409570 (mtr)  LOC25495206 (mtr)  LOC25501278 (mtr)  LOC100192054 (zma)  LOC100253470 (vvi)  LOC100304207 (zma)  LOC100779678 (gma)  LOC100787206 (gma)  LOC100794750 (gma)  LOC100805154 (gma)  RFP1 (gma)  LOC100818135 (gma)  LOC101247279 (sly)  LOC101251870 (sly)  LOC101256874 (sly)  LOC101260009 (sly)  LOC103627714 (zma)  LOC103835644 (bra)  LOC103840719 (bra)  LOC103850167 (bra)  LOC103863965 (bra)  LOC104882287 (vvi) 
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_173809.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_173809.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G23980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.9 AT5G23280 TCP family transcription factor [detail] 832392
4.8 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834783
4.8 AT3G08600 transmembrane protein, putative (DUF1191) [detail] 820007
4.7 ATL3 RING/U-box superfamily protein [detail] 843563
4.4 AT3G50620 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 824225
Coexpressed
gene list		 [Coexpressed gene list for AT1G23980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263024_at
263024_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263024_at
263024_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263024_at
263024_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839010      
Refseq ID (protein) NP_173809.1 


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