[←][→] ath   AT1G25540 Gene
functional annotation
Function   phytochrome and flowering time regulatory protein (PFT1)  
GO BP
GO:1905499 [list] [network] trichome papilla formation  (2 genes)  IMP  
GO:0010091 [list] [network] trichome branching  (28 genes)  IMP  
GO:0009911 [list] [network] positive regulation of flower development  (40 genes)  IMP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IMP  
GO:0010218 [list] [network] response to far red light  (54 genes)  IMP  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (71 genes)  IMP  
GO:0010114 [list] [network] response to red light  (74 genes)  IMP  
GO:0031349 [list] [network] positive regulation of defense response  (108 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO CC
GO:0016592 [list] [network] mediator complex  (43 genes)  IBA IDA  
GO:0044798 [list] [network] nuclear transcription factor complex  (95 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (36 genes)  NAS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001077596.1  NP_173925.3 
BLAST NP_001077596.1  NP_173925.3 
Orthologous [Ortholog page] LOC4346673 (osa)  LOC7466913 (ppo)  LOC25494748 (mtr)  LOC100259509 (vvi)  LOC100786254 (gma)  LOC100801664 (gma)  LOC101258928 (sly)  LOC103647359 (zma)  LOC103835463 (bra)  LOC103840588 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001077596.1)
nucl 9,  cyto 1  (predict for NP_173925.3)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for NP_001077596.1)
other 5,  scret 4  (predict for NP_173925.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PFT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT1G72390 nuclear receptor coactivator [detail] 843571
7.4 AT4G32760 ENTH/VHS/GAT family protein [detail] 829412
6.8 AT1G04300 TRAF-like superfamily protein [detail] 839551
6.1 SLK1 SEUSS-like 1 [detail] 828657
6.1 AT5G04460 RING/U-box superfamily protein [detail] 830324
5.9 MED9 mediator of RNA polymerase II transcription subunit-like protein [detail] 841951
Coexpressed
gene list		 [Coexpressed gene list for PFT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255725_at
255725_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255725_at
255725_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255725_at
255725_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839141      
Refseq ID (protein) NP_001077596.1 
NP_173925.3 


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