[←][→] ath   AT1G27340 Gene
functional annotation
Function   Galactose oxidase/kelch repeat superfamily protein  
GO BP
GO:0060776 [list] [network] simple leaf morphogenesis  (7 genes)  IMP  
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (30 genes)  IMP  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (33 genes)  IMP  
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA  
KEGG
Protein NP_564278.1 
BLAST NP_564278.1 
Orthologous [Ortholog page] LOC4327256 (osa)  LOC7481222 (ppo)  LOC11444169 (mtr)  LOC100193727 (zma)  LOC100242085 (vvi)  LOC100775721 (gma)  LOC100795488 (gma)  LOC100800464 (gma)  LOC100810179 (gma)  LOC101246347 (sly)  LOC103636344 (zma)  LOC103829071 (bra)  LOC103839047 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_564278.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for NP_564278.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 3
ath00052 Galactose metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with LCR on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 AT4G16360 SNF1-related protein kinase regulatory subunit beta-2 [detail] 827331
4.6 AT3G07270 GTP cyclohydrolase I [detail] 819915
4.4 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 834812
Coexpressed
gene list		 [Coexpressed gene list for LCR]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264440_at
264440_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264440_at
264440_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264440_at
264440_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839623      
Refseq ID (protein) NP_564278.1 


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