[][] ath   AT1G27520 Gene
functional annotation
Function   Glycosyl hydrolase family 47 protein
GO BP
GO:0030433 [list] [network] ubiquitin-dependent ERAD pathway  (36 genes)  IMP  
GO:0006486 [list] [network] protein glycosylation  (134 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004571 [list] [network] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity  (5 genes)  IEA  
GO:0004559 [list] [network] alpha-mannosidase activity  (8 genes)  IMP  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_564288.1 
BLAST NP_564288.1 
Orthologous [Ortholog page] LOC4330685 (osa)LOC11407473 (mtr)LOC100245051 (vvi)LOC100793674 (gma)LOC101257158 (sly)LOC103627708 (zma)LOC103839033 (bra)
Subcellular
localization
wolf
vacu 5,  extr 2,  chlo 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1  (predict for NP_564288.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_564288.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G27520 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.0 AT1G19485 Transducin/WD40 repeat-like superfamily protein [detail] 838534
6.7 NHX5 sodium hydrogen exchanger 5 [detail] 841878
6.4 AT1G70620 cyclin-like protein [detail] 843399
5.7 OTS2 Cysteine proteinases superfamily protein [detail] 837598
5.7 CYP88A3 cytochrome P450, family 88, subfamily A, polypeptide 3 [detail] 839311
Coexpressed
gene list
[Coexpressed gene list for AT1G27520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262299_at
262299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262299_at
262299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262299_at
262299_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839643    
Refseq ID (protein) NP_564288.1 


The preparation time of this page was 0.2 [sec].