| functional annotation |
| Function |
60S ribosomal protein L18A-1 |
Plant GARDEN Plant GARDEN JBrowse
|
| GO BP |
|
GO:0006412 [list] [network] translation
|
(911 genes)
|
IEA
|
 |
|
| GO CC |
|
| GO MF |
|
GO:0003735 [list] [network] structural constituent of ribosome
|
(63 genes)
|
IEA
|
|
|
GO:0003729 [list] [network] mRNA binding
|
(1535 genes)
|
IDA
|
|
|
| KEGG |
ath03010 [list] [network] Ribosome (359 genes) |
 |
| Protein |
NP_001077626.1
NP_001154385.1
NP_564343.1
|
| BLAST |
NP_001077626.1
NP_001154385.1
NP_564343.1
|
| Orthologous |
|
Subcellular
localization
wolf |
|
chlo 4,
plas 1,
extr 1,
cyto 1,
mito 1,
vacu 1,
E.R. 1,
cysk_nucl 1,
golg_plas 1,
E.R._vacu 1,
cyto_E.R. 1
|
(predict for NP_001077626.1)
|
|
cyto 4,
pero 2,
cyto_E.R. 2,
cyto_plas 2
|
(predict for NP_001154385.1)
|
|
cyto 4,
chlo 3,
nucl 1,
mito 1,
plas 1,
extr 1,
nucl_plas 1,
mito_plas 1
|
(predict for NP_564343.1)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001077626.1)
|
|
other 8
|
(predict for NP_001154385.1)
|
|
other 8
|
(predict for NP_564343.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00620 |
Pyruvate metabolism |
2 |
 |
| ath00600 |
Sphingolipid metabolism |
2 |
 |
Genes directly connected with RPL18AA on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 10.0 |
SYP51 |
syntaxin of plants 51 |
[detail] |
838193 |
| 9.1 |
RHF2A |
RING-H2 group F2A |
[detail] |
832260 |
| 8.9 |
AT1G78895 |
Reticulon family protein |
[detail] |
844227 |
| 8.8 |
LSD1 |
LSD1 zinc finger family protein |
[detail] |
827786 |
| 8.7 |
AT5G16110 |
uncharacterized protein |
[detail] |
831468 |
| 8.4 |
GLX2-5 |
glyoxalase 2-5 |
[detail] |
817693 |
| 8.4 |
AT4G08330 |
uncharacterized protein |
[detail] |
826387 |
| 7.8 |
RHA1 |
Ras small GTP-binding family protein |
[detail] |
834549 |
| 7.6 |
KEU |
Sec1/munc18-like (SM) proteins superfamily |
[detail] |
837791 |
| 7.2 |
FIS1B |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
831114 |
| 6.9 |
AT2G19180 |
uncharacterized protein |
[detail] |
816435 |
| 6.9 |
TIP1 |
Ankyrin repeat family protein with DHHC zinc finger domain-containing protein |
[detail] |
832157 |
| 6.8 |
AT5G64880 |
uncharacterized protein |
[detail] |
836611 |
| 6.7 |
SPT1 |
serine palmitoyltransferase 1 |
[detail] |
824039 |
| 6.5 |
AT5G01800 |
saposin B domain-containing protein |
[detail] |
831924 |
| 5.8 |
GLX2-1 |
glyoxalase 2-1 |
[detail] |
818944 |
| 5.6 |
AT3G07760 |
Sterile alpha motif (SAM) domain-containing protein |
[detail] |
819967 |
|
Coexpressed
gene list |
[Coexpressed gene list for RPL18AA]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
260026_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
260026_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
260026_at
X axis is samples (xls file), and Y axis is log-expression.
|
At1g29970 Gene
