[←][→] ath   AT1G30610 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein  
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (8 genes)  IMP  
GO:0010098 [list] [network] suspensor development  (12 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP NAS TAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
KEGG
Protein NP_001185117.1  NP_174349.1 
BLAST NP_001185117.1  NP_174349.1 
Orthologous [Ortholog page] LOC4325508 (osa)  LOC25479292 (mtr)  LOC100250871 (vvi)  LOC100787028 (gma)  LOC101268344 (sly)  LOC103636169 (zma)  LOC103840374 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 3  (predict for NP_001185117.1)
nucl 6,  chlo 4  (predict for NP_174349.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001185117.1)
chlo 6  (predict for NP_174349.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB2279 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 CFM3A CRM family member 3A [detail] 821881
9.1 EMB2453 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830116
8.5 EMB1865 CRS1 / YhbY (CRM) domain-containing protein [detail] 821368
8.3 CFM3B CRM family member 3B [detail] 827098
8.2 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein [detail] 829097
6.6 CRS1 maize chloroplast splicing factor-like protein [detail] 831476
6.3 AT5G61040 hypothetical protein [detail] 836225
5.3 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein [detail] 841886
Coexpressed
gene list		 [Coexpressed gene list for EMB2279]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263220_at
263220_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263220_at
263220_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263220_at
263220_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839941      
Refseq ID (protein) NP_001185117.1 
NP_174349.1 


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