ATTED-II : GeneID search result

[←][→] ath At1g30810 Gene

functional annotation

Function

Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

GO BP

GO:0048573 [list] [network] photoperiodism, flowering	(94 genes)	IMP
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1656 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0032453 [list] [network] histone H3K4 demethylase activity	(5 genes)	IDA
GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI

KEGG

Protein

NP_001185118.1 NP_001319118.1 NP_174367.6

BLAST

NP_001185118.1 NP_001319118.1 NP_174367.6

Orthologous

[Ortholog page] MEE27 (ath) JMJ14 (ath) LOC4338351 (osa) LOC11427424 (mtr) LOC18095778 (ppo) LOC18103470 (ppo) LOC25486667 (mtr) LOC100781830 (gma) LOC100784581 (gma) LOC100801775 (gma) LOC100814590 (gma) LOC101265508 (sly) LOC103833425 (bra) LOC103840300 (bra) LOC103858232 (bra) LOC103865362 (bra) LOC103865493 (bra) LOC123116559 (tae) LOC123180747 (tae) LOC123427966 (hvu)

Subcellular
localization
wolf

nucl 10	(predict for NP_001185118.1)
nucl 10	(predict for NP_001319118.1)
nucl 10	(predict for NP_174367.6)

Subcellular
localization
TargetP

other 9	(predict for NP_001185118.1)
other 9	(predict for NP_001319118.1)
other 9	(predict for NP_174367.6)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

Genes directly connected with JMJ18 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.3	G18F	autophagy 18 F-like protein	[detail]	835562
5.1	FAB1D	FORMS APLOID AND BINUCLEATE CELLS 1A	[detail]	840326
5.0	AT2G39950	flocculation protein	[detail]	818582

Coexpressed
gene list

[Coexpressed gene list for JMJ18]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264528_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264528_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264528_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839963
Refseq ID (protein)	NP_001185118.1
	NP_001319118.1
	NP_174367.6

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