| functional annotation |
| Function |
GTP-binding family protein |
|
| GO BP |
|
GO:0000028 [list] [network] ribosomal small subunit assembly
|
(26 genes)
|
IBA
|
 |
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_174383.1
|
| BLAST |
NP_174383.1
|
| Orthologous |
[Ortholog page]
LOC4344938 (osa)
LOC11405637 (mtr)
LOC25482601 (mtr)
LOC25495752 (mtr)
LOC100192967 (zma)
LOC100244086 (vvi)
LOC100381675 (zma)
LOC100815085 (gma)
LOC101257826 (sly)
LOC103828792 (bra)
LOC103840279 (bra)
|
Subcellular
localization
wolf |
|
chlo 5,
mito 5,
chlo_mito 5
|
(predict for NP_174383.1)
|
|
Subcellular
localization
TargetP |
|
mito 9
|
(predict for NP_174383.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03008 |
Ribosome biogenesis in eukaryotes |
2 |
 |
Genes directly connected with AT1G30960 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 12.2 |
AT4G04940 |
transducin family protein / WD-40 repeat family protein |
[detail] |
825833 |
| 12.1 |
PPR596 |
PENTATRICOPEPTIDE REPEAT 596 |
[detail] |
844367 |
| 11.9 |
AT3G19440 |
Pseudouridine synthase family protein |
[detail] |
821478 |
| 11.8 |
AT4G36580 |
AAA-type ATPase family protein |
[detail] |
829810 |
| 11.2 |
AT1G64600 |
copper ion binding / methyltransferase |
[detail] |
842768 |
| 10.2 |
AT3G27550 |
RNA-binding CRS1 / YhbY (CRM) domain protein |
[detail] |
822377 |
| 10.1 |
AT5G12220 |
las1-like family protein |
[detail] |
831096 |
| 10.0 |
MORF1 |
multiple organellar RNA editing factor |
[detail] |
827747 |
| 9.7 |
AT2G41670 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
818765 |
| 9.3 |
AT4G40000 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
830161 |
| 9.3 |
AT1G63250 |
DEA(D/H)-box RNA helicase family protein |
[detail] |
842631 |
| 8.8 |
AT5G39960 |
GTP-binding protein |
[detail] |
833993 |
| 8.8 |
AT4G04180 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
825733 |
| 8.8 |
AT5G51540 |
Zincin-like metalloproteases family protein |
[detail] |
835228 |
| 8.3 |
GAF1 |
Polymerase/histidinol phosphatase-like protein |
[detail] |
836120 |
| 7.8 |
AT4G04790 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
825816 |
| 7.0 |
PSD1 |
phosphatidylserine decarboxylase 1 |
[detail] |
827373 |
| 6.8 |
SDG40 |
SET domain group 40 |
[detail] |
831588 |
| 6.5 |
RUS4 |
root UVB sensitive protein (Protein of unknown function, DUF647) |
[detail] |
816879 |
| 6.5 |
AT1G15870 |
Mitochondrial glycoprotein family protein |
[detail] |
838157 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G30960]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
265154_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
265154_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
265154_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G30960 Gene
