[←][→] ath   At1g42440 Gene
functional annotation
Function   pre-rRNA-processing TSR1-like protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_564480.1 
BLAST NP_564480.1 
Orthologous [Ortholog page] LOC4350322 (osa)  LOC7485634 (ppo)  LOC25490299 (mtr)  LOC100812533 (gma)  LOC100819167 (gma)  LOC101256673 (sly)  LOC103849552 (bra)  LOC103871382 (bra)  LOC123147796 (tae)  LOC123156763 (tae)  LOC123165198 (tae)  LOC123407096 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 3,  mito 1,  cysk 1  (predict for NP_564480.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_564480.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
Genes directly connected with AT1G42440 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.3 AT1G63810 nucleolar protein [detail] 842684
11.1 AT5G11240 transducin family protein / WD-40 repeat family protein [detail] 830994
10.9 AT4G18905 Transducin/WD40 repeat-like superfamily protein [detail] 827625
8.5 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein [detail] 833577
8.4 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 817731
8.0 TIM44-2 translocase inner membrane subunit 44-2 [detail] 818180
6.9 FAS4 RNA helicase family protein [detail] 840232
Coexpressed
gene list		 [Coexpressed gene list for AT1G42440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262272_at
262272_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262272_at
262272_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262272_at
262272_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840848      
Refseq ID (protein) NP_564480.1 


The preparation time of this page was 0.1 [sec].