[←][→] ath   AT1G42960 Gene
functional annotation
Function   inner membrane localized protein  
GO BP
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IBA IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
KEGG
Protein NP_564482.1 
BLAST NP_564482.1 
Orthologous [Ortholog page] LOC7462581 (ppo)  LOC7494713 (ppo)  LOC11408591 (mtr)  LOC11418213 (mtr)  LOC100250729 (vvi)  LOC100306344 (gma)  LOC100527765 (gma)  LOC100786309 (gma)  LOC100791540 (gma)  LOC101249717 (sly)  LOC101264321 (sly)  LOC103833306 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_564482.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_564482.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00061 Fatty acid biosynthesis 4
ath00780 Biotin metabolism 4
ath01212 Fatty acid metabolism 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00020 Citrate cycle (TCA cycle) 3
Genes directly connected with AT1G42960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT2G22230 Thioesterase superfamily protein [detail] 816756
10.0 AT3G15690 Single hybrid motif superfamily protein [detail] 820812
8.9 AT1G52670 Single hybrid motif superfamily protein [detail] 841699
7.5 ATHM2 Thioredoxin superfamily protein [detail] 825653
7.4 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein [detail] 831652
6.6 AT5G16660 Low-density receptor-like protein [detail] 831528
5.2 OEP37 chloroplast outer envelope protein 37 [detail] 819000
5.1 AT4G09670 Oxidoreductase family protein [detail] 826553
Coexpressed
gene list		 [Coexpressed gene list for AT1G42960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259627_at
259627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259627_at
259627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259627_at
259627_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840894      
Refseq ID (protein) NP_564482.1 


The preparation time of this page was 0.2 [sec].