[←][→] ath   At1g43130 Gene
functional annotation
Function   uncharacterized protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010222 [list] [network] stem vascular tissue pattern formation  (5 genes)  ISS  
GO:1901565 [list] [network] organonitrogen compound catabolic process  (591 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  HDA  
GO:0005768 [list] [network] endosome  (350 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG
Protein NP_001321430.1  NP_001321431.1  NP_564483.1 
BLAST NP_001321430.1  NP_001321431.1  NP_564483.1 
Orthologous [Ortholog page] LOC4325049 (osa)  LOC4338904 (osa)  LOC7467805 (ppo)  LOC7489777 (ppo)  LOC11423678 (mtr)  LOC100792693 (gma)  LOC100801920 (gma)  LOC101249632 (sly)  LOC101264314 (sly)  LOC103833139 (bra)  LOC123057261 (tae)  LOC123062730 (tae)  LOC123071548 (tae)  LOC123079886 (tae)  LOC123134722 (tae)  LOC123182145 (tae)  LOC123444796 (hvu)  LOC123446602 (hvu) 
Subcellular
localization
wolf
plas 4,  vacu 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for NP_001321430.1)
plas 4,  vacu 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for NP_001321431.1)
plas 2,  E.R. 2,  cysk 2,  cysk_plas 2,  E.R._plas 2  (predict for NP_564483.1)
Subcellular
localization
TargetP
scret 5,  mito 4,  other 3  (predict for NP_001321430.1)
scret 5,  mito 4,  other 3  (predict for NP_001321431.1)
other 7,  chlo 3  (predict for NP_564483.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath04145 Phagosome 3
Genes directly connected with LCV2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT4G29960 uncharacterized protein [detail] 829119
5.8 AT5G51510 jagunal-like protein [detail] 835225
5.8 AL3 alfin-like 3 [detail] 823316
5.4 AT4G33910 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 829535
Coexpressed
gene list		 [Coexpressed gene list for LCV2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264422_at
264422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264422_at
264422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264422_at
264422_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840912      
Refseq ID (protein) NP_001321430.1 
NP_001321431.1 
NP_564483.1 


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