[←][→] ath   AT1G44446 Gene
functional annotation
Function   Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein  
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (41 genes)  IEA IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (80 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IEA  
GO:0042651 [list] [network] thylakoid membrane  (391 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM ISS  
GO MF
GO:0010277 [list] [network] chlorophyllide a oxygenase [overall] activity  (4 genes)  IDA IMP  
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (57 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_001321683.1  NP_175088.1  NP_973969.1  NP_973970.1 
BLAST NP_001321683.1  NP_175088.1  NP_973969.1  NP_973970.1 
Orthologous [Ortholog page] LOC4349430 (osa)  LOC4349433 (osa)  LOC7460954 (ppo)  LOC11422505 (mtr)  LOC100247245 (vvi)  LOC100284976 (zma)  LOC100780485 (gma)  LOC100805998 (gma)  LOC100806298 (gma)  LOC101244441 (sly)  LOC101261422 (sly)  LOC103847721 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 4,  vacu 1,  pero 1  (predict for NP_001321683.1)
chlo 7,  E.R. 1,  extr 1,  pero 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_175088.1)
chlo 7,  E.R. 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_973969.1)
chlo 8,  E.R. 1  (predict for NP_973970.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001321683.1)
chlo 8  (predict for NP_175088.1)
chlo 8  (predict for NP_973969.1)
chlo 8  (predict for NP_973970.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin and chlorophyll metabolism 4
ath00900 Terpenoid backbone biosynthesis 2
Genes directly connected with CH1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 ATH13 ABC2 homolog 13 [detail] 836618
9.6 HCF107 high chlorophyll fluorescent 107 [detail] 820961
9.2 AT2G35260 CAAX protease self-immunity protein [detail] 818093
8.6 AT1G05207 [detail] 28716268
8.4 JAC1 J-domain protein required for chloroplast accumulation response 1 [detail] 843847
8.2 AT5G39530 hypothetical protein (DUF1997) [detail] 833949
8.1 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 828884
5.9 AT2G20250 hypothetical protein [detail] 816544
4.9 AT1G13650 hypothetical protein [detail] 837926
4.5 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 824774
Coexpressed
gene list		 [Coexpressed gene list for CH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245242_at
245242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245242_at
245242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245242_at
245242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841029      
Refseq ID (protein) NP_001321683.1 
NP_175088.1 
NP_973969.1 
NP_973970.1 


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