[←][→] ath   At1g48160 Gene
functional annotation
Function   signal recognition particle 19 kDa protein, putative / SRP19    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_001323146.1  NP_175250.1 
BLAST NP_001323146.1  NP_175250.1 
Orthologous [Ortholog page] LOC4340957 (osa)  LOC7462510 (ppo)  LOC7493484 (ppo)  LOC25499231 (mtr)  LOC100500027 (gma)  LOC100801614 (gma)  LOC101248030 (sly)  LOC103833043 (bra)  LOC103868692 (bra)  LOC123147737 (tae)  LOC123160317 (tae)  LOC123166765 (tae)  LOC123410823 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001323146.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_175250.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001323146.1)
other 7  (predict for NP_175250.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath04130 SNARE interactions in vesicular transport 3
Genes directly connected with AT1G48160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.5 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit [detail] 818966
7.2 AT4G14600 Target SNARE coiled-coil domain protein [detail] 827108
7.0 AUG2 HAUS augmin-like complex subunit [detail] 817860
6.9 AT2G16930 Ribosomal protein L27 family protein [detail] 816196
6.8 AT3G55600 Membrane fusion protein Use1 [detail] 824725
6.5 AT4G17010 transcription factor IIIB [detail] 827409
6.4 PUX1 plant UBX domain-containing protein 1 [detail] 822350
6.2 AT1G51160 SNARE-like superfamily protein [detail] 841539
Coexpressed
gene list		 [Coexpressed gene list for AT1G48160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260726_at
260726_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260726_at
260726_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260726_at
260726_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841235      
Refseq ID (protein) NP_001323146.1 
NP_175250.1 


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