[←][→] ath   AT1G48240 Gene
functional annotation
Function   Putative plant snare 12  
GO BP
GO:0048280 [list] [network] vesicle fusion with Golgi apparatus  (8 genes)  IBA  
GO:0006896 [list] [network] Golgi to vacuole transport  (19 genes)  IBA  
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (24 genes)  IBA  
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (35 genes)  IBA  
GO:0006623 [list] [network] protein targeting to vacuole  (36 genes)  IBA  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (84 genes)  IBA  
GO CC
GO:0012507 [list] [network] ER to Golgi transport vesicle membrane  (29 genes)  IBA  
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IBA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  IBA  
GO:0000149 [list] [network] SNARE binding  (54 genes)  IBA  
KEGG
Protein NP_001323414.1  NP_175258.2 
BLAST NP_001323414.1  NP_175258.2 
Orthologous [Ortholog page] NPSN13 (ath)  LOC4332931 (osa)  LOC4344040 (osa)  LOC7477198 (ppo)  LOC11446715 (mtr)  LOC25486607 (mtr)  LOC100251065 (vvi)  LOC100273395 (zma)  LOC100285150 (zma)  LOC100778540 (gma)  LOC100795077 (gma)  LOC101248280 (sly)  LOC103647882 (zma)  LOC103839252 (bra)  LOC103859709 (bra)  LOC103869684 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  E.R. 1,  cyto_pero 1,  mito 1,  extr 1,  pero 1,  golg 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001323414.1)
nucl 4,  golg 3,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_175258.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001323414.1)
other 8  (predict for NP_175258.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04933 AGE-RAGE signaling pathway in diabetic complications 2
Genes directly connected with NPSN12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 NPSN13 Putative plant snare 13 [detail] 821008
5.8 FEI1 Leucine-rich repeat protein kinase family protein [detail] 840032
5.3 ROP2 RHO-related protein from plants 2 [detail] 838598
4.9 AT2G38610 RNA-binding KH domain-containing protein [detail] 818443
4.2 AT1G35510 O-fucosyltransferase family protein [detail] 840444
Coexpressed
gene list		 [Coexpressed gene list for NPSN12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262245_at
262245_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262245_at
262245_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262245_at
262245_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841244      
Refseq ID (protein) NP_001323414.1 
NP_175258.2 


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