ATTED-II : GeneID search result

[←][→] ath AT1G48310 Gene

functional annotation

Function

chromatin remodeling factor18

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

KEGG

Protein

NP_001321269.1 NP_001321270.1 NP_001321271.1 NP_175265.3

BLAST

NP_001321269.1 NP_001321270.1 NP_001321271.1 NP_175265.3

Orthologous

[Ortholog page] LOC4344031 (osa) LOC11446717 (mtr) LOC100264852 (vvi) LOC100501760 (zma) LOC100778246 (gma) LOC100797654 (gma) LOC101251457 (sly) LOC103868684 (bra)

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, golg 1, chlo_mito 1	(predict for NP_001321269.1)
cyto 6, chlo 1, nucl 1	(predict for NP_001321270.1)
cyto 6, chlo 1, nucl 1	(predict for NP_001321271.1)
cyto 7, nucl 1, chlo 1, golg 1, cysk_nucl 1, nucl_plas 1	(predict for NP_175265.3)

Subcellular
localization
TargetP

other 7	(predict for NP_001321269.1)
other 7	(predict for NP_001321270.1)
other 7	(predict for NP_001321271.1)
other 7	(predict for NP_175265.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with CHR18 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.2	AT1G52618	hypothetical protein	[detail]	5007794
4.9	AT4G38120	ARM repeat superfamily protein	[detail]	829968
4.7	AT3G46960	RNA helicase, ATP-dependent, SK12/DOB1 protein	[detail]	823849

Coexpressed
gene list

[Coexpressed gene list for CHR18]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262233_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262233_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262233_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841251
Refseq ID (protein)	NP_001321269.1
	NP_001321270.1
	NP_001321271.1
	NP_175265.3

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