[←][→] ath   At1g48360 Gene
functional annotation
Function   zinc ion binding/nucleic acid binding/hydrolase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0036297 [list] [network] interstrand cross-link repair  (9 genes)  IGI IMP  
GO:0007129 [list] [network] homologous chromosome pairing at meiosis  (29 genes)  IGI  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (40 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0004528 [list] [network] phosphodiesterase I activity  (2 genes)  IEA  
GO:0016818 [list] [network] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  (238 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3100 genes)  IEA  
KEGG
Protein NP_001117447.1  NP_001319172.1  NP_001323020.1  NP_001323021.1  NP_001323022.1  NP_175269.2 
BLAST NP_001117447.1  NP_001319172.1  NP_001323020.1  NP_001323021.1  NP_001323022.1  NP_175269.2 
Orthologous [Ortholog page] LOC4340269 (osa)  LOC7466190 (ppo)  LOC11446824 (mtr)  LOC100793881 (gma)  LOC101247756 (sly)  LOC123152551 (tae)  LOC123160377 (tae)  LOC123166999 (tae)  LOC123410833 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  plas 1,  golg 1,  cyto_nucl 1,  cysk_nucl 1,  golg_plas 1  (predict for NP_001117447.1)
nucl 5,  mito 2,  cyto_mito 2,  cysk 1  (predict for NP_001319172.1)
nucl 5,  mito 1,  chlo 1,  cysk 1,  cyto_mito 1  (predict for NP_001323020.1)
cyto 3,  nucl 2,  golg 2,  chlo 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001323021.1)
nucl 4,  mito 2,  cyto_mito 1,  chlo 1,  cysk 1  (predict for NP_001323022.1)
nucl 5,  mito 3,  cyto_mito 2,  nucl_plas 2  (predict for NP_175269.2)
Subcellular
localization
TargetP
mito 9  (predict for NP_001117447.1)
mito 9  (predict for NP_001319172.1)
mito 9  (predict for NP_001323020.1)
other 9  (predict for NP_001323021.1)
mito 9  (predict for NP_001323022.1)
mito 9  (predict for NP_175269.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 2
Genes directly connected with AT1G48360 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 AT1G79950 RAD3-like DNA-binding helicase protein [detail] 844335
6.5 MCM8 minichromosome maintenance 8 [detail] 820123
5.5 AT3G28370 spindle assembly checkpoint component [detail] 822466
Coexpressed
gene list		 [Coexpressed gene list for AT1G48360]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262242_at
262242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262242_at
262242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262242_at
262242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841256      
Refseq ID (protein) NP_001117447.1 
NP_001319172.1 
NP_001323020.1 
NP_001323021.1 
NP_001323022.1 
NP_175269.2 


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