[←][→] ath   AT1G48620 Gene
functional annotation
Function   high mobility group A5  
GO BP
GO:0016584 [list] [network] nucleosome positioning  (11 genes)  IBA  
GO:0031936 [list] [network] negative regulation of chromatin silencing  (14 genes)  IBA  
GO:0030261 [list] [network] chromosome condensation  (18 genes)  IBA  
GO:0045910 [list] [network] negative regulation of DNA recombination  (18 genes)  IBA  
GO:0009294 [list] [network] DNA mediated transformation  (26 genes)  IMP  
GO:0006334 [list] [network] nucleosome assembly  (34 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IBA  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IBA  
GO MF
GO:0031492 [list] [network] nucleosomal DNA binding  (9 genes)  IBA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
KEGG
Protein NP_175295.1 
BLAST NP_175295.1 
Orthologous [Ortholog page] AT-1SNBP (gma)  HON4 (ath)  LOC7462486 (ppo)  LOC7493496 (ppo)  LOC11409630 (mtr)  LOC100788215 (gma)  LOC100802941 (gma)  LOC100853898 (vvi)  LOC102660898 (gma)  LOC103838863 (bra)  LOC103868672 (bra)  LOC103871451 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_175295.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_175295.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HON5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.7 HON4 winged-helix DNA-binding transcription factor family protein [detail] 821328
7.9 AT1G06760 winged-helix DNA-binding transcription factor family protein [detail] 837187
7.4 AT1G47970 nucleolin [detail] 841215
6.0 AT4G14900 FRIGIDA-like protein [detail] 827147
4.2 AT5G58540 Protein kinase superfamily protein [detail] 835967
Coexpressed
gene list		 [Coexpressed gene list for HON5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261303_at
261303_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261303_at
261303_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261303_at
261303_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841283      
Refseq ID (protein) NP_175295.1 


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