[←][→] ath   At1g49530 Gene
functional annotation
Function   geranylgeranyl pyrophosphate synthase 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0033384 [list] [network] geranyl diphosphate biosynthetic process  (10 genes)  IEA  
GO:0033386 [list] [network] geranylgeranyl diphosphate biosynthetic process  (10 genes)  IEA  
GO:0045337 [list] [network] farnesyl diphosphate biosynthetic process  (13 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (163 genes)  TAS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0004311 [list] [network] farnesyltranstransferase activity  (12 genes)  IDA IGI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_175376.1 
BLAST NP_175376.1 
Orthologous
Subcellular
localization
wolf
mito 4,  chlo 4,  vacu 1  (predict for NP_175376.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_175376.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with GGPS6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 AT1G49520 SWIB complex BAF60b domain-containing protein [detail] 841376
4.8 MC7 metacaspase 7 [detail] 844269
4.6 AT1G61065 1,3-beta-glucan synthase component (DUF1218) [detail] 842398
Coexpressed
gene list		 [Coexpressed gene list for GGPS6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262391_at
262391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262391_at
262391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262391_at
262391_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841377      
Refseq ID (protein) NP_175376.1 


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