[←][→] ath   At1g49970 Gene
functional annotation
Function   CLP protease proteolytic subunit 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006364 [list] [network] rRNA processing  (169 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (567 genes)  IDA  
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA  
KEGG
Protein NP_564560.1 
BLAST NP_564560.1 
Orthologous [Ortholog page] LOC4339792 (osa)  LOC7469631 (ppo)  LOC11419358 (mtr)  LOC100806258 (gma)  LOC100820008 (gma)  LOC101256043 (sly)  LOC103832904 (bra)  LOC123070664 (tae)  LOC123149534 (tae)  LOC123183368 (tae)  LOC123452597 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1  (predict for NP_564560.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_564560.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPR1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.8 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 837432
9.9 CLPP5 nuclear encoded CLP protease 5 [detail] 839433
9.4 CLPP3 CLP protease proteolytic subunit 3 [detail] 842985
8.4 AT1G36320 uncharacterized protein [detail] 840539
8.3 AT3G03890 FMN binding protein [detail] 821082
7.3 AAE15 acyl-activating enzyme 15 [detail] 827043
7.0 ABCI13 non-intrinsic ABC protein 11 [detail] 842852
6.5 NFU1 NFU domain protein 1 [detail] 828196
Coexpressed
gene list		 [Coexpressed gene list for CLPR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261634_at
261634_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261634_at
261634_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261634_at
261634_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841420      
Refseq ID (protein) NP_564560.1 


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