[←][→] ath   AT1G49970 Gene
functional annotation
Function   CLP protease proteolytic subunit 1  
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (27 genes)  IBA  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (831 genes)  IDA  
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009368 [list] [network] endopeptidase Clp complex  (9 genes)  IBA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0051117 [list] [network] ATPase binding  (15 genes)  IBA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (30 genes)  IBA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (93 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
KEGG
Protein NP_564560.1 
BLAST NP_564560.1 
Orthologous [Ortholog page] LOC4339792 (osa)  LOC7469631 (ppo)  LOC11419358 (mtr)  LOC100253136 (vvi)  LOC100274001 (zma)  LOC100806258 (gma)  LOC100820008 (gma)  LOC101256043 (sly)  LOC103832904 (bra) 
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1  (predict for NP_564560.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_564560.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 837432
9.7 CLPP5 nuclear encoded CLP protease 5 [detail] 839433
8.6 AT3G03890 FMN binding protein [detail] 821082
8.5 CLPP3 CLP protease proteolytic subunit 3 [detail] 842985
7.9 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 818114
7.2 AT1G36320 hypothetical protein [detail] 840539
6.5 NFU2 NIFU-like protein 2 [detail] 835057
6.3 AAE15 acyl-activating enzyme 15 [detail] 827043
5.6 ABCB28 non-intrinsic ABC protein 8 [detail] 828650
Coexpressed
gene list		 [Coexpressed gene list for CLPR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261634_at
261634_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261634_at
261634_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261634_at
261634_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841420      
Refseq ID (protein) NP_564560.1 


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