[←][→] ath   At1g50250 Gene
functional annotation
Function   FTSH protease 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (8 genes)  TAS  
GO:0010206 [list] [network] photosystem II repair  (13 genes)  TAS  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (16 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_564563.1 
BLAST NP_564563.1 
Orthologous [Ortholog page] VAR1 (ath)  LOC4342113 (osa)  LOC7494681 (ppo)  LOC7496874 (ppo)  LOC25490290 (mtr)  LOC100037730 (sly)  LOC100803824 (gma)  LOC100807408 (gma)  LOC103831194 (bra)  LOC123149765 (tae)  LOC123162610 (tae)  LOC123168509 (tae)  LOC123408493 (hvu) 
Subcellular
localization
wolf
chlo 7,  plas 3  (predict for NP_564563.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564563.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FTSH1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.0 VAR1 FtsH extracellular protease family [detail] 834232
13.4 HCF173 high chlorophyll fluorescence phenotype 173 [detail] 838243
12.7 FTSH8 FTSH protease 8 [detail] 837154
12.1 VAR2 FtsH extracellular protease family [detail] 817646
10.7 AT3G24190 Protein kinase superfamily protein [detail] 822005
10.4 AT5G35970 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 833589
9.6 HCF244 NAD(P)-binding Rossmann-fold superfamily protein [detail] 829678
8.6 OHP2 one-helix protein 2 [detail] 840297
8.1 CCD1 carotenoid cleavage dioxygenase 1 [detail] 825527
7.5 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 841720
7.3 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II [detail] 817019
Coexpressed
gene list		 [Coexpressed gene list for FTSH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262473_at
262473_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262473_at
262473_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262473_at
262473_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841447      
Refseq ID (protein) NP_564563.1 


The preparation time of this page was 0.1 [sec].