ATTED-II : GeneID search result

[←][→] ath AT1G50280 Gene

functional annotation

Function

Phototropic-responsive NPH3 family protein

GO BP

GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IMP
GO:0016567 [list] [network] protein ubiquitination	(624 genes)	IEA

GO CC

GO:0031463 [list] [network] Cul3-RING ubiquitin ligase complex	(4 genes)	IPI
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(4605 genes)

IPI

KEGG

Protein

NP_001321469.1 NP_175446.2

BLAST

NP_001321469.1 NP_175446.2

Orthologous

[Ortholog page] AT3G19850 (ath) LOC7460684 (ppo) LOC7492951 (ppo) LOC9271000 (osa) LOC25482728 (mtr) LOC25492820 (mtr) LOC100259859 (vvi) LOC100279832 (zma) LOC100785736 (gma) LOC100794458 (gma) LOC100795481 (gma) LOC100808259 (gma) LOC101259112 (sly) LOC103832886 (bra) LOC103836925 (bra) LOC103859826 (bra)

Subcellular
localization
wolf

nucl 5, mito 3, chlo 2	(predict for NP_001321469.1)
chlo 9	(predict for NP_175446.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001321469.1)
other 5	(predict for NP_175446.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G50280 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.3	AT3G15570	Phototropic-responsive NPH3 family protein	[detail]	820797
5.8	AT4G34220	Leucine-rich repeat protein kinase family protein	[detail]	829571
5.3	AT1G54820	Protein kinase superfamily protein	[detail]	841921
4.7	MAP70-4	microtubule-associated proteins 70-4	[detail]	838049

Coexpressed
gene list

[Coexpressed gene list for AT1G50280]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262464_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262464_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262464_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841450
Refseq ID (protein)	NP_001321469.1
Refseq ID (protein)	NP_175446.2

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