[←][→] ath   AT1G50500 Gene
functional annotation
Function   Membrane trafficking VPS53 family protein  
GO BP
GO:0007009 [list] [network] plasma membrane organization  (5 genes)  IMP  
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (24 genes)  IBA  
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (29 genes)  ISS  
GO:0010286 [list] [network] heat acclimation  (53 genes)  IMP  
GO:0009408 [list] [network] response to heat  (229 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (563 genes)  IMP  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0000938 [list] [network] GARP complex  (6 genes)  IBA IDA  
GO:0010008 [list] [network] endosome membrane  (162 genes)  IEA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001185188.1  NP_001322422.1  NP_001322423.1  NP_001322424.1  NP_564573.3 
BLAST NP_001185188.1  NP_001322422.1  NP_001322423.1  NP_001322424.1  NP_564573.3 
Orthologous [Ortholog page] LOC4324975 (osa)  LOC11409544 (mtr)  LOC100251847 (vvi)  LOC100501884 (zma)  LOC100791359 (gma)  LOC100799852 (gma)  LOC101256582 (sly)  LOC103868618 (bra) 
Subcellular
localization
wolf
chlo 7,  cyto 1,  nucl 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001185188.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_001322422.1)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001322423.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_001322424.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_564573.3)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for NP_001185188.1)
other 6  (predict for NP_001322422.1)
other 6  (predict for NP_001322423.1)
other 6  (predict for NP_001322424.1)
other 6  (predict for NP_564573.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
Genes directly connected with HIT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 SEC5A exocyst complex component sec5 [detail] 844020
8.1 AT5G11490 adaptin family protein [detail] 831021
8.0 AT3G50590 Transducin/WD40 repeat-like superfamily protein [detail] 824223
6.4 VPS35C VPS35 homolog C [detail] 824294
6.4 AT3G15410 Leucine-rich repeat (LRR) family protein [detail] 820780
5.2 SFC ARF GTPase-activating protein [detail] 831171
Coexpressed
gene list		 [Coexpressed gene list for HIT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261880_at
261880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261880_at
261880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261880_at
261880_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841472      
Refseq ID (protein) NP_001185188.1 
NP_001322422.1 
NP_001322423.1 
NP_001322424.1 
NP_564573.3 


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