[←][→] ath   At1g50500 Gene
functional annotation
Function   Membrane trafficking VPS53 family protein      
GO BP
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (8 genes)  ISS  
GO:0007009 [list] [network] plasma membrane organization  (8 genes)  IMP  
GO:0010286 [list] [network] heat acclimation  (71 genes)  IMP  
GO:0009408 [list] [network] response to heat  (287 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IMP  
GO CC
GO:0000938 [list] [network] GARP complex  (4 genes)  IDA  
GO:0000139 [list] [network] Golgi membrane  (37 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001185188.1  NP_001322422.1  NP_001322423.1  NP_001322424.1  NP_564573.3 
BLAST NP_001185188.1  NP_001322422.1  NP_001322423.1  NP_001322424.1  NP_564573.3 
Orthologous [Ortholog page] LOC4324975 (osa)  LOC7455871 (ppo)  LOC11409544 (mtr)  LOC100791359 (gma)  LOC100799852 (gma)  LOC101256582 (sly)  LOC103868618 (bra)  LOC123062804 (tae)  LOC123071647 (tae)  LOC123445010 (hvu) 
Subcellular
localization
wolf
chlo 7,  cyto 1,  nucl 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001185188.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_001322422.1)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001322423.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_001322424.1)
chlo 4,  cyto 2,  chlo_mito 2,  pero 1,  cyto_nucl 1,  cyto_plas 1  (predict for NP_564573.3)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for NP_001185188.1)
other 6  (predict for NP_001322422.1)
other 6  (predict for NP_001322423.1)
other 6  (predict for NP_001322424.1)
other 6  (predict for NP_564573.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 7
Genes directly connected with HIT1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT3G50590 Transducin/WD40 repeat-like superfamily protein [detail] 824223
8.2 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 831488
8.1 SEC5A exocyst complex component sec5 [detail] 844020
7.7 AT2G27460 sec23/sec24 transport family protein [detail] 817291
7.7 AT3G15410 Leucine-rich repeat (LRR) family protein [detail] 820780
Coexpressed
gene list		 [Coexpressed gene list for HIT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261880_at
261880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261880_at
261880_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261880_at
261880_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841472      
Refseq ID (protein) NP_001185188.1 
NP_001322422.1 
NP_001322423.1 
NP_001322424.1 
NP_564573.3 


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