[][] ath   At1g53560 Gene
functional annotation
Function   Ribosomal protein L18ae family Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO:0071310 [list] [network] cellular response to organic substance  (1485 genes)  IEA  
GO:0044281 [list] [network] small molecule metabolic process  (2411 genes)  IEA  
GO CC
GO MF
KEGG
Protein NP_564634.1 
BLAST NP_564634.1 
Orthologous [Ortholog page] AT1G17080 (ath)LOC4326318 (osa)LOC4327700 (osa)LOC4339624 (osa)LOC7491359 (ppo)LOC25487121 (mtr)LOC100781376 (gma)LOC100810998 (gma)LOC101244058 (sly)LOC101244447 (sly)LOC101264350 (sly)LOC103835974 (bra)LOC103843166 (bra)LOC103871119 (bra)LOC123052030 (tae)LOC123060927 (tae)LOC123061719 (tae)LOC123069487 (tae)LOC123077987 (tae)LOC123078758 (tae)LOC123146038 (tae)LOC123183121 (tae)LOC123443340 (hvu)LOC123444056 (hvu)LOC123450430 (hvu)
Subcellular
localization
wolf
plas 3,  chlo 1,  cyto 1,  E.R. 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_564634.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564634.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 5
Genes directly connected with AT1G53560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.9 MAP3KA mitogen-activated protein kinase kinase kinase 3 [detail] 841792
4.4 PAP26 purple acid phosphatase 26 [detail] 833406
4.1 BGLU16 beta glucosidase 16 [detail] 825183
4.1 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 817083
Coexpressed
gene list
[Coexpressed gene list for AT1G53560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260983_at
260983_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260983_at
260983_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260983_at
260983_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 841791    
Refseq ID (protein) NP_564634.1 


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