[←][→] ath   At1g54110 Gene
functional annotation
Function   Membrane fusion protein Use1      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (47 genes)
Protein NP_001320883.1  NP_001320884.1  NP_564649.1 
BLAST NP_001320883.1  NP_001320884.1  NP_564649.1 
Orthologous [Ortholog page] AT3G55600 (ath)  LOC4329112 (osa)  LOC4346146 (osa)  LOC4346583 (osa)  LOC7490468 (ppo)  LOC9269842 (osa)  LOC9271609 (osa)  LOC11418616 (mtr)  LOC25500698 (mtr)  LOC100793814 (gma)  LOC100811568 (gma)  LOC100812755 (gma)  LOC101246592 (sly)  LOC103841471 (bra)  LOC123130008 (tae)  LOC123133244 (tae)  LOC123143084 (tae)  LOC123143309 (tae)  LOC123151848 (tae)  LOC123159208 (tae)  LOC123168125 (tae)  LOC123409658 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 3,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001320883.1)
chlo 5,  golg 2,  plas 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001320884.1)
chlo 3,  cyto 3,  golg 2,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for NP_564649.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001320883.1)
mito 7,  other 3  (predict for NP_001320884.1)
other 3  (predict for NP_564649.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with AT1G54110 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.1 ATNTH1 DNA glycosylase superfamily protein [detail] 817703
4.9 AT1G19860 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 838574
4.7 SK20 SKP1-like 20 [detail] 819203
4.7 AT3G11470 4'-phosphopantetheinyl transferase superfamily [detail] 820320
Coexpressed
gene list		 [Coexpressed gene list for AT1G54110]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263154_at
263154_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263154_at
263154_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263154_at
263154_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841850      
Refseq ID (protein) NP_001320883.1 
NP_001320884.1 
NP_564649.1 


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