[←][→] ath   AT1G54150 Gene
functional annotation
Function   E3 Ubiquitin ligase family protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (1508 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (55 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001320570.1  NP_564653.1 
BLAST NP_001320570.1  NP_564653.1 
Orthologous [Ortholog page] LOC4331809 (osa)  LOC7475693 (ppo)  LOC7478101 (ppo)  LOC11435018 (mtr)  LOC100193216 (zma)  LOC100242895 (vvi)  LOC100785166 (gma)  LOC100800058 (gma)  LOC100811939 (gma)  LOC101259919 (sly)  LOC103832629 (bra)  LOC103871070 (bra) 
Subcellular
localization
wolf
chlo 5,  plas 2,  golg 1,  extr 1,  vacu 1  (predict for NP_001320570.1)
plas 3,  E.R. 2,  cyto_plas 2,  cyto 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for NP_564653.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_001320570.1)
scret 8  (predict for NP_564653.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
Genes directly connected with SPL2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT3G08780 BRISC complex subunit Abro1-like protein [detail] 820025
6.1 AT3G09180 mediator of RNA polymerase II transcription subunit [detail] 820074
6.0 ALG3 asparagine-linked glycosylation 3 [detail] 819388
4.8 AT2G27480 Calcium-binding EF-hand family protein [detail] 817293
Coexpressed
gene list		 [Coexpressed gene list for SPL2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263162_at
263162_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263162_at
263162_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263162_at
263162_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841855      
Refseq ID (protein) NP_001320570.1 
NP_564653.1 


The preparation time of this page was 0.2 [sec].