[←][→] ath   At1g54540 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family      
GO BP
GO CC
GO MF
KEGG
Protein NP_175856.1 
BLAST NP_175856.1 
Orthologous [Ortholog page] NHL25 (ath)  AT1G65690 (ath)  LOC7474070 (ppo)  LOC7484916 (ppo)  LOC7494378 (ppo)  LOC11426665 (mtr)  LOC18106695 (ppo)  LOC25484544 (mtr)  LOC25489194 (mtr)  LOC100778798 (gma)  LOC100780820 (gma)  LOC100781699 (gma)  LOC100782663 (gma)  LOC100789322 (gma)  LOC100813932 (gma)  LOC101258038 (sly)  LOC101262768 (sly)  LOC103838730 (bra)  LOC103852291 (bra)  LOC103863700 (bra)  LOC103868314 (bra)  LOC104645573 (sly)  LOC123047066 (tae)  LOC123122567 (tae)  LOC123181268 (tae)  LOC123410012 (hvu) 
Subcellular
localization
wolf
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_175856.1)
Subcellular
localization
TargetP
other 7  (predict for NP_175856.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 3
ath02010 ABC transporters 2
Genes directly connected with AT1G54540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.1 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 831237
15.2 CYP86B1 cytochrome P450, family 86, subfamily B, polypeptide 1 [detail] 832383
14.6 RWP1 HXXXD-type acyl-transferase family protein [detail] 834106
13.9 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 819425
11.9 AT2G21100 Disease resistance-responsive (dirigent-like protein) family protein [detail] 816645
8.2 ABCG16 ABC-2 type transporter family protein [detail] 824675
8.2 AT4G03540 Uncharacterized protein family (UPF0497) [detail] 825651
6.2 AT5G47530 Auxin-responsive family protein [detail] 834803
Coexpressed
gene list		 [Coexpressed gene list for AT1G54540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263005_at
263005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263005_at
263005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263005_at
263005_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841896      
Refseq ID (protein) NP_175856.1 


The preparation time of this page was 0.1 [sec].