[←][→] ath   AT1G54680 Gene
functional annotation
Function   translation initiation factor 3 subunit I  
GO BP
GO:0006413 [list] [network] translational initiation  (95 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (901 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (48 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (95 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001185227.1  NP_001319230.1  NP_001319231.1  NP_001320305.1 
BLAST NP_001185227.1  NP_001319230.1  NP_001319231.1  NP_001320305.1 
Orthologous [Ortholog page] LOC100257204 (vvi)  LOC101265151 (sly)  LOC103844420 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001185227.1)
chlo 4,  chlo_mito 3,  nucl 2,  cyto_nucl 1,  mito 1,  plas 1,  extr 1,  cysk 1,  cysk_plas 1  (predict for NP_001319230.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001319231.1)
chlo 4,  nucl 4,  chlo_mito 2,  plas 1,  extr 1,  cysk 1,  cysk_plas 1  (predict for NP_001320305.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_001185227.1)
chlo 3  (predict for NP_001319230.1)
other 6  (predict for NP_001319231.1)
chlo 3  (predict for NP_001320305.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G54680 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.7 AMSH2 associated molecule with the SH3 domain of STAM 2 [detail] 837603
4.3 AT3G60340 alpha/beta-Hydrolases superfamily protein [detail] 825205
3.9 AT5G05710 Pleckstrin homology (PH) domain superfamily protein [detail] 830455
Coexpressed
gene list		 [Coexpressed gene list for AT1G54680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264236_at
264236_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264236_at
264236_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264236_at
264236_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841909      
Refseq ID (protein) NP_001185227.1 
NP_001319230.1 
NP_001319231.1 
NP_001320305.1 


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