[←][→] ath   At1g55250 Gene
functional annotation
Function   histone mono-ubiquitination 2      
GO BP
GO:0010390 [list] [network] histone monoubiquitination  (2 genes)  IMP  
GO:0033523 [list] [network] histone H2B ubiquitination  (4 genes)  IMP  
GO:0010162 [list] [network] seed dormancy process  (49 genes)  IMP  
GO:0009965 [list] [network] leaf morphogenesis  (102 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (161 genes)  IGI  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
KEGG
Protein NP_001154428.1  NP_001185233.1  NP_001185234.1  NP_001321104.1  NP_564680.4 
BLAST NP_001154428.1  NP_001185233.1  NP_001185234.1  NP_001321104.1  NP_564680.4 
Orthologous [Ortholog page] LOC4349420 (osa)  LOC7455740 (ppo)  LOC25484108 (mtr)  LOC25494911 (mtr)  LOC100796610 (gma)  LOC100811776 (gma)  LOC101264751 (sly)  LOC103832600 (bra)  LOC123063337 (tae)  LOC123072319 (tae)  LOC123076543 (tae)  LOC123080550 (tae)  LOC123080578 (tae)  LOC123445404 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001154428.1)
nucl 7,  cyto 3  (predict for NP_001185233.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001185234.1)
nucl 7,  cyto 3  (predict for NP_001321104.1)
nucl 7,  cyto 3  (predict for NP_564680.4)
Subcellular
localization
TargetP
other 9  (predict for NP_001154428.1)
other 7,  chlo 4  (predict for NP_001185233.1)
other 9  (predict for NP_001185234.1)
other 7,  chlo 4  (predict for NP_001321104.1)
other 7  (predict for NP_564680.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03022 Basal transcription factors 2
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with HUB2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 RRC1 RNA recognition motif (RRM)-containing protein [detail] 832577
8.0 PRP40B pre-mRNA-processing protein 40B [detail] 821504
7.8 TAF2 TBP-associated factor 2 [detail] 843733
7.3 AT1G17680 tetratricopeptide repeat (TPR)-containing protein [detail] 838344
Coexpressed
gene list		 [Coexpressed gene list for HUB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259662_at
259662_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259662_at
259662_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259662_at
259662_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841968      
Refseq ID (protein) NP_001154428.1 
NP_001185233.1 
NP_001185234.1 
NP_001321104.1 
NP_564680.4 


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