[←][→] ath   AT1G55250 Gene
functional annotation
Function   histone mono-ubiquitination 2  
GO BP
GO:0010390 [list] [network] histone monoubiquitination  (2 genes)  IMP  
GO:0033523 [list] [network] histone H2B ubiquitination  (4 genes)  IMP  
GO:0010162 [list] [network] seed dormancy process  (32 genes)  IMP  
GO:0009965 [list] [network] leaf morphogenesis  (96 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (322 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IPI  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001154428.1  NP_001185233.1  NP_001185234.1  NP_001321104.1  NP_564680.4 
BLAST NP_001154428.1  NP_001185233.1  NP_001185234.1  NP_001321104.1  NP_564680.4 
Orthologous [Ortholog page] LOC4349420 (osa)  LOC25484108 (mtr)  LOC25494911 (mtr)  LOC100251829 (vvi)  LOC100274688 (zma)  LOC100796610 (gma)  LOC100811776 (gma)  LOC101264751 (sly)  LOC103832600 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001154428.1)
nucl 7,  cyto 3  (predict for NP_001185233.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001185234.1)
nucl 7,  cyto 3  (predict for NP_001321104.1)
nucl 7,  cyto 3  (predict for NP_564680.4)
Subcellular
localization
TargetP
other 9  (predict for NP_001154428.1)
other 7,  chlo 4  (predict for NP_001185233.1)
other 9  (predict for NP_001185234.1)
other 7,  chlo 4  (predict for NP_001321104.1)
other 7  (predict for NP_564680.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with HUB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 PRP40B pre-mRNA-processing protein 40B [detail] 821504
7.9 RRC1 RNA recognition motif (RRM)-containing protein [detail] 832577
7.6 UNE6 LUC7 related protein [detail] 821276
6.4 CPL4 C-terminal domain phosphatase-like 4 [detail] 5008312
6.3 AT1G64572 [detail] 7922279
6.0 ATLIG4 DNA ligase IV [detail] 835822
5.1 AT5G18980 ARM repeat superfamily protein [detail] 832016
Coexpressed
gene list		 [Coexpressed gene list for HUB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259662_at
259662_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259662_at
259662_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259662_at
259662_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841968      
Refseq ID (protein) NP_001154428.1 
NP_001185233.1 
NP_001185234.1 
NP_001321104.1 
NP_564680.4 


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