[←][→] ath   At1g55460 Gene
functional annotation
Function   DNA/RNA-binding protein Kin17, conserved region      
GO BP
GO:0035874 [list] [network] cellular response to copper ion starvation  (2 genes)  IMP  
GO:0048638 [list] [network] regulation of developmental growth  (257 genes)  IMP  
GO CC
GO:0016607 [list] [network] nuclear speck  (50 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_564690.1 
BLAST NP_564690.1 
Orthologous [Ortholog page] AT5G51795 (ath)  LOC7458149 (ppo)  LOC7487955 (ppo)  LOC11436625 (mtr)  LOC100784271 (gma)  LOC100785931 (gma)  LOC101263612 (sly)  LOC103829782 (bra)  LOC103832586 (bra)  LOC112328801 (ppo)  LOC112936102 (osa)  LOC123068680 (tae)  LOC123132225 (tae)  LOC123136262 (tae)  LOC123143767 (tae)  LOC123401904 (hvu)  LOC123442722 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_564690.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564690.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 4
Genes directly connected with AT1G55460 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 AT3G47120 RNA recognition motif (RRM)-containing protein [detail] 823865
9.3 CSP3 cold shock domain protein 3 [detail] 816297
9.3 AT3G18790 pre-mRNA-splicing factor ISY1-like protein [detail] 821412
8.6 MOS2 D111/G-patch domain-containing protein [detail] 840246
7.3 AT4G35540 POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 [detail] 829706
7.2 AT5G19900 PRLI-interacting factor [detail] 832112
6.5 SKIP2 SKP1/ASK1-interacting protein 2 [detail] 836860
Coexpressed
gene list		 [Coexpressed gene list for AT1G55460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265079_at
265079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265079_at
265079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265079_at
265079_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841993      
Refseq ID (protein) NP_564690.1 


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