[←][→] ath   AT1G55540 Gene
functional annotation
Function   Nuclear pore complex protein  
GO BP
GO:0010070 [list] [network] zygote asymmetric cell division  (7 genes)  IMP  
GO:0006606 [list] [network] protein import into nucleus  (47 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP NAS  
GO CC
GO:0044615 [list] [network] nuclear pore nuclear basket  (2 genes)  IBA  
GO:0044613 [list] [network] nuclear pore central transport channel  (5 genes)  IBA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008139 [list] [network] nuclear localization sequence binding  (20 genes)  IBA  
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IBA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001117499.2  NP_564694.2 
BLAST NP_001117499.2  NP_564694.2 
Orthologous [Ortholog page] LOC4344328 (osa)  LOC7461338 (ppo)  LOC25484132 (mtr)  LOC100245011 (vvi)  LOC100276843 (zma)  LOC100794048 (gma)  LOC100806517 (gma)  LOC101268441 (sly)  LOC103655932 (zma)  LOC103832578 (bra)  LOC104645555 (sly) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001117499.2)
nucl 9,  cyto_nucl 5  (predict for NP_564694.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001117499.2)
other 9  (predict for NP_564694.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 4
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with LNO1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 SUS2 Pre-mRNA-processing-splicing factor [detail] 844347
8.6 EMB2016 embryo defective 2016 [detail] 819736
8.5 emb1507 U5 small nuclear ribonucleoprotein helicase [detail] 838690
7.1 AT1G79190 ARM repeat superfamily protein [detail] 844260
Coexpressed
gene list		 [Coexpressed gene list for LNO1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265074_at
265074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265074_at
265074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265074_at
265074_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842002      
Refseq ID (protein) NP_001117499.2 
NP_564694.2 


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