[←][→] ath   AT1G55915 Gene
functional annotation
Function   zinc ion binding protein  
GO BP
GO:0006281 [list] [network] DNA repair  (295 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001319245.1  NP_001321635.1  NP_001321636.1  NP_564704.2 
BLAST NP_001319245.1  NP_001321635.1  NP_001321636.1  NP_564704.2 
Orthologous [Ortholog page] LOC4340366 (osa)  LOC7483646 (ppo)  LOC25489116 (mtr)  LOC100260002 (vvi)  LOC100383072 (zma)  LOC100795976 (gma)  LOC101267289 (sly)  LOC103832546 (bra)  LOC103832579 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for NP_001319245.1)
chlo 7,  nucl 1,  mito 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001321635.1)
chlo 7,  nucl 1,  mito 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001321636.1)
nucl 7,  cyto 3  (predict for NP_564704.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001319245.1)
other 3,  chlo 3  (predict for NP_001321635.1)
other 3,  chlo 3  (predict for NP_001321636.1)
other 7  (predict for NP_564704.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
Genes directly connected with AT1G55915 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.2 ATE2F2 winged-helix DNA-binding transcription factor family protein [detail] 841202
4.2 AT3G03970 ARM repeat superfamily protein [detail] 819552
4.1 AT4G15890 binding protein [detail] 827271
Coexpressed
gene list		 [Coexpressed gene list for AT1G55915]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260597_at
260597_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260597_at
260597_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260597_at
260597_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842042      
Refseq ID (protein) NP_001319245.1 
NP_001321635.1 
NP_001321636.1 
NP_564704.2 


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